RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
POLR2A-209ENST00000617998 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
POLR2A-209ENST00000617998 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
POLR2A-209ENST00000617998 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
POLR2A-209ENST00000617998 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
POLR2A-209ENST00000617998 LPAP08519 4548 aa3.67□□□□□ -1.82
POLR2A-209ENST00000617998 MT1EP04732 61 aa3.6□□□□□ -1.83
POLR2A-209ENST00000617998 RNF213Q63HN8 5207 aa3.57□□□□□ -1.84
POLR2A-209ENST00000617998 MT1LQ93083 61 aa3.55□□□□□ -1.84
POLR2A-209ENST00000617998 MT3P25713 68 aa3.55□□□□□ -1.84
POLR2A-209ENST00000617998 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
POLR2A-209ENST00000617998 MT1MQ8N339 61 aa3.55□□□□□ -1.84
POLR2A-209ENST00000617998 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
POLR2A-209ENST00000617998 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
POLR2A-209ENST00000617998 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
POLR2A-209ENST00000617998 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
POLR2A-209ENST00000617998 MUC17Q685J3 4493 aa3.5□□□□□ -1.85
POLR2A-209ENST00000617998 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
POLR2A-209ENST00000617998 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
POLR2A-209ENST00000617998 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
POLR2A-209ENST00000617998 TNXBP22105 4242 aa3.45□□□□□ -1.86
POLR2A-209ENST00000617998 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
POLR2A-209ENST00000617998 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
POLR2A-209ENST00000617998 MUC2Q02817 5179 aa3.41□□□□□ -1.86
POLR2A-209ENST00000617998 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
POLR2A-209ENST00000617998 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
POLR2A-209ENST00000617998 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
POLR2A-209ENST00000617998 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
POLR2A-209ENST00000617998 MT1AP04731 61 aa3.24□□□□□ -1.89
POLR2A-209ENST00000617998 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
POLR2A-209ENST00000617998 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
POLR2A-209ENST00000617998 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
POLR2A-209ENST00000617998 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
POLR2A-209ENST00000617998 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
POLR2A-209ENST00000617998 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
POLR2A-209ENST00000617998 NEBP20929 6669 aa3.18□□□□□ -1.9
POLR2A-209ENST00000617998 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
POLR2A-209ENST00000617998 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
POLR2A-209ENST00000617998 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
POLR2A-209ENST00000617998 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
POLR2A-209ENST00000617998 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
POLR2A-209ENST00000617998 PRM1P04553 51 aa3.01□□□□□ -1.93
POLR2A-209ENST00000617998 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
POLR2A-209ENST00000617998 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
POLR2A-209ENST00000617998 KMT2DO14686 5537 aa2.94□□□□□ -1.94
POLR2A-209ENST00000617998 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
POLR2A-209ENST00000617998 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
POLR2A-209ENST00000617998 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
POLR2A-209ENST00000617998 USH2AO75445 5202 aa2.82□□□□□ -1.96
POLR2A-209ENST00000617998 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
POLR2A-209ENST00000617998 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
POLR2A-209ENST00000617998 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
POLR2A-209ENST00000617998 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
POLR2A-209ENST00000617998 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
POLR2A-209ENST00000617998 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
POLR2A-209ENST00000617998 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
POLR2A-209ENST00000617998 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
POLR2A-209ENST00000617998 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
POLR2A-209ENST00000617998 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
POLR2A-209ENST00000617998 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
POLR2A-209ENST00000617998 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
POLR2A-209ENST00000617998 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
POLR2A-209ENST00000617998 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
POLR2A-209ENST00000617998 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
POLR2A-209ENST00000617998 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
POLR2A-209ENST00000617998 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
POLR2A-209ENST00000617998 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
POLR2A-209ENST00000617998 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
POLR2A-209ENST00000617998 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
POLR2A-209ENST00000617998 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
POLR2A-209ENST00000617998 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
POLR2A-209ENST00000617998 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
POLR2A-209ENST00000617998 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
POLR2A-209ENST00000617998 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
POLR2A-209ENST00000617998 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
POLR2A-209ENST00000617998 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
POLR2A-209ENST00000617998 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
POLR2A-209ENST00000617998 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 95.2 ms