RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
RECQL4-209ENST00000617875 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
RECQL4-209ENST00000617875 MT1LQ93083 61 aa5.36□□□□□ -1.55
RECQL4-209ENST00000617875 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
RECQL4-209ENST00000617875 MT1EP04732 61 aa5.32□□□□□ -1.56
RECQL4-209ENST00000617875 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
RECQL4-209ENST00000617875 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
RECQL4-209ENST00000617875 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
RECQL4-209ENST00000617875 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
RECQL4-209ENST00000617875 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
RECQL4-209ENST00000617875 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
RECQL4-209ENST00000617875 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
RECQL4-209ENST00000617875 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
RECQL4-209ENST00000617875 MT1MQ8N339 61 aa5.05□□□□□ -1.6
RECQL4-209ENST00000617875 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
RECQL4-209ENST00000617875 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
RECQL4-209ENST00000617875 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
RECQL4-209ENST00000617875 SPRR2EP22531 72 aa4.91□□□□□ -1.62
RECQL4-209ENST00000617875 SPRR2BP35325 72 aa4.91□□□□□ -1.62
RECQL4-209ENST00000617875 SPRR2AP35326 72 aa4.91□□□□□ -1.62
RECQL4-209ENST00000617875 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
RECQL4-209ENST00000617875 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
RECQL4-209ENST00000617875 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
RECQL4-209ENST00000617875 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
RECQL4-209ENST00000617875 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
RECQL4-209ENST00000617875 PRM1P04553 51 aa4.71□□□□□ -1.66
RECQL4-209ENST00000617875 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
RECQL4-209ENST00000617875 SPRR2DP22532 72 aa4.66□□□□□ -1.66
RECQL4-209ENST00000617875 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
RECQL4-209ENST00000617875 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
RECQL4-209ENST00000617875 MT1AP04731 61 aa4.46□□□□□ -1.7
RECQL4-209ENST00000617875 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
RECQL4-209ENST00000617875 MT4P47944 62 aa4.44□□□□□ -1.7
RECQL4-209ENST00000617875 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
RECQL4-209ENST00000617875 MT3P25713 68 aa4.29□□□□□ -1.72
RECQL4-209ENST00000617875 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
RECQL4-209ENST00000617875 MUC19Q7Z5P9 8384 aa4.19□□□□□ -1.74
RECQL4-209ENST00000617875 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
RECQL4-209ENST00000617875 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
RECQL4-209ENST00000617875 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
RECQL4-209ENST00000617875 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
RECQL4-209ENST00000617875 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
RECQL4-209ENST00000617875 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
RECQL4-209ENST00000617875 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
RECQL4-209ENST00000617875 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
RECQL4-209ENST00000617875 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
RECQL4-209ENST00000617875 NEBP20929 6669 aa3.81□□□□□ -1.8
RECQL4-209ENST00000617875 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
RECQL4-209ENST00000617875 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
RECQL4-209ENST00000617875 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
RECQL4-209ENST00000617875 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
RECQL4-209ENST00000617875 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
RECQL4-209ENST00000617875 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
RECQL4-209ENST00000617875 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
RECQL4-209ENST00000617875 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
RECQL4-209ENST00000617875 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
RECQL4-209ENST00000617875 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
RECQL4-209ENST00000617875 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
RECQL4-209ENST00000617875 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
RECQL4-209ENST00000617875 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
RECQL4-209ENST00000617875 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
RECQL4-209ENST00000617875 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
RECQL4-209ENST00000617875 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
RECQL4-209ENST00000617875 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
RECQL4-209ENST00000617875 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
RECQL4-209ENST00000617875 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
RECQL4-209ENST00000617875 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
RECQL4-209ENST00000617875 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
RECQL4-209ENST00000617875 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
RECQL4-209ENST00000617875 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
RECQL4-209ENST00000617875 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
RECQL4-209ENST00000617875 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
RECQL4-209ENST00000617875 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
RECQL4-209ENST00000617875 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
RECQL4-209ENST00000617875 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
RECQL4-209ENST00000617875 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
RECQL4-209ENST00000617875 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 28 ms