RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
PCDHA11-202ENST00000616325 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
PCDHA11-202ENST00000616325 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
PCDHA11-202ENST00000616325 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
PCDHA11-202ENST00000616325 MT1LQ93083 61 aa4.48□□□□□ -1.69
PCDHA11-202ENST00000616325 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
PCDHA11-202ENST00000616325 MT1EP04732 61 aa4.44□□□□□ -1.7
PCDHA11-202ENST00000616325 MT1GP13640 62 aa4.44□□□□□ -1.7
PCDHA11-202ENST00000616325 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
PCDHA11-202ENST00000616325 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
PCDHA11-202ENST00000616325 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
PCDHA11-202ENST00000616325 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
PCDHA11-202ENST00000616325 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
PCDHA11-202ENST00000616325 MT1MQ8N339 61 aa4.17□□□□□ -1.74
PCDHA11-202ENST00000616325 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
PCDHA11-202ENST00000616325 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
PCDHA11-202ENST00000616325 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PCDHA11-202ENST00000616325 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
PCDHA11-202ENST00000616325 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
PCDHA11-202ENST00000616325 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
PCDHA11-202ENST00000616325 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
PCDHA11-202ENST00000616325 PRM1P04553 51 aa4□□□□□ -1.77
PCDHA11-202ENST00000616325 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
PCDHA11-202ENST00000616325 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.78
PCDHA11-202ENST00000616325 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.78
PCDHA11-202ENST00000616325 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
PCDHA11-202ENST00000616325 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
PCDHA11-202ENST00000616325 MT1AP04731 61 aa3.72□□□□□ -1.81
PCDHA11-202ENST00000616325 SPRR2EP22531 72 aa3.7□□□□□ -1.82
PCDHA11-202ENST00000616325 SPRR2BP35325 72 aa3.7□□□□□ -1.82
PCDHA11-202ENST00000616325 SPRR2AP35326 72 aa3.7□□□□□ -1.82
PCDHA11-202ENST00000616325 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
PCDHA11-202ENST00000616325 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
PCDHA11-202ENST00000616325 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
PCDHA11-202ENST00000616325 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
PCDHA11-202ENST00000616325 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
PCDHA11-202ENST00000616325 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
PCDHA11-202ENST00000616325 SPRR2DP22532 72 aa3.51□□□□□ -1.85
PCDHA11-202ENST00000616325 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
PCDHA11-202ENST00000616325 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
PCDHA11-202ENST00000616325 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
PCDHA11-202ENST00000616325 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
PCDHA11-202ENST00000616325 MT3P25713 68 aa3.37□□□□□ -1.87
PCDHA11-202ENST00000616325 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
PCDHA11-202ENST00000616325 MT4P47944 62 aa3.3□□□□□ -1.88
PCDHA11-202ENST00000616325 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
PCDHA11-202ENST00000616325 NEBP20929 6669 aa3.26□□□□□ -1.89
PCDHA11-202ENST00000616325 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
PCDHA11-202ENST00000616325 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
PCDHA11-202ENST00000616325 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
PCDHA11-202ENST00000616325 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
PCDHA11-202ENST00000616325 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
PCDHA11-202ENST00000616325 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
PCDHA11-202ENST00000616325 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
PCDHA11-202ENST00000616325 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PCDHA11-202ENST00000616325 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
PCDHA11-202ENST00000616325 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
PCDHA11-202ENST00000616325 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
PCDHA11-202ENST00000616325 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
PCDHA11-202ENST00000616325 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
PCDHA11-202ENST00000616325 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
PCDHA11-202ENST00000616325 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
PCDHA11-202ENST00000616325 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
PCDHA11-202ENST00000616325 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
PCDHA11-202ENST00000616325 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
PCDHA11-202ENST00000616325 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
PCDHA11-202ENST00000616325 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
PCDHA11-202ENST00000616325 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
PCDHA11-202ENST00000616325 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PCDHA11-202ENST00000616325 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PCDHA11-202ENST00000616325 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PCDHA11-202ENST00000616325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PCDHA11-202ENST00000616325 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
PCDHA11-202ENST00000616325 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PCDHA11-202ENST00000616325 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
PCDHA11-202ENST00000616325 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PCDHA11-202ENST00000616325 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms