RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
PPP4R3B-205ENST00000616288 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
PPP4R3B-205ENST00000616288 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
PPP4R3B-205ENST00000616288 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
PPP4R3B-205ENST00000616288 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
PPP4R3B-205ENST00000616288 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
PPP4R3B-205ENST00000616288 MT1EP04732 61 aa4.18□□□□□ -1.74
PPP4R3B-205ENST00000616288 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
PPP4R3B-205ENST00000616288 USH2AO75445 5202 aa4.14□□□□□ -1.75
PPP4R3B-205ENST00000616288 LCE2BO14633 110 aa4.12□□□□□ -1.75
PPP4R3B-205ENST00000616288 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
PPP4R3B-205ENST00000616288 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
PPP4R3B-205ENST00000616288 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
PPP4R3B-205ENST00000616288 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
PPP4R3B-205ENST00000616288 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.78
PPP4R3B-205ENST00000616288 MT1MQ8N339 61 aa3.95□□□□□ -1.78
PPP4R3B-205ENST00000616288 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
PPP4R3B-205ENST00000616288 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
PPP4R3B-205ENST00000616288 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
PPP4R3B-205ENST00000616288 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
PPP4R3B-205ENST00000616288 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
PPP4R3B-205ENST00000616288 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
PPP4R3B-205ENST00000616288 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
PPP4R3B-205ENST00000616288 MT1AP04731 61 aa3.73□□□□□ -1.81
PPP4R3B-205ENST00000616288 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
PPP4R3B-205ENST00000616288 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
PPP4R3B-205ENST00000616288 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
PPP4R3B-205ENST00000616288 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
PPP4R3B-205ENST00000616288 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PPP4R3B-205ENST00000616288 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
PPP4R3B-205ENST00000616288 MT3P25713 68 aa3.54□□□□□ -1.84
PPP4R3B-205ENST00000616288 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
PPP4R3B-205ENST00000616288 SPRR2EP22531 72 aa3.49□□□□□ -1.85
PPP4R3B-205ENST00000616288 SPRR2BP35325 72 aa3.49□□□□□ -1.85
PPP4R3B-205ENST00000616288 SPRR2AP35326 72 aa3.49□□□□□ -1.85
PPP4R3B-205ENST00000616288 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
PPP4R3B-205ENST00000616288 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
PPP4R3B-205ENST00000616288 LCE2AQ5TA79 106 aaPredicted RBP3.4□□□□□ -1.86
PPP4R3B-205ENST00000616288 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
PPP4R3B-205ENST00000616288 SPRR2DP22532 72 aa3.31□□□□□ -1.88
PPP4R3B-205ENST00000616288 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PPP4R3B-205ENST00000616288 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
PPP4R3B-205ENST00000616288 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
PPP4R3B-205ENST00000616288 MT4P47944 62 aa3.12□□□□□ -1.91
PPP4R3B-205ENST00000616288 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
PPP4R3B-205ENST00000616288 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
PPP4R3B-205ENST00000616288 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
PPP4R3B-205ENST00000616288 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
PPP4R3B-205ENST00000616288 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
PPP4R3B-205ENST00000616288 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
PPP4R3B-205ENST00000616288 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PPP4R3B-205ENST00000616288 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PPP4R3B-205ENST00000616288 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
PPP4R3B-205ENST00000616288 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
PPP4R3B-205ENST00000616288 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PPP4R3B-205ENST00000616288 NEBP20929 6669 aa2.5□□□□□ -2.01
PPP4R3B-205ENST00000616288 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
PPP4R3B-205ENST00000616288 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PPP4R3B-205ENST00000616288 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
PPP4R3B-205ENST00000616288 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
PPP4R3B-205ENST00000616288 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
PPP4R3B-205ENST00000616288 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
PPP4R3B-205ENST00000616288 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
PPP4R3B-205ENST00000616288 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
PPP4R3B-205ENST00000616288 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
PPP4R3B-205ENST00000616288 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
PPP4R3B-205ENST00000616288 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
PPP4R3B-205ENST00000616288 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PPP4R3B-205ENST00000616288 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PPP4R3B-205ENST00000616288 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
PPP4R3B-205ENST00000616288 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
PPP4R3B-205ENST00000616288 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
PPP4R3B-205ENST00000616288 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
PPP4R3B-205ENST00000616288 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
PPP4R3B-205ENST00000616288 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
PPP4R3B-205ENST00000616288 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
PPP4R3B-205ENST00000616288 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 5.2 ms