RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CENPEQ02224 2701 aa1.19□□□□□ -2.22
CBWD3-209ENST00000614377 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
CBWD3-209ENST00000614377 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
CBWD3-209ENST00000614377 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
CBWD3-209ENST00000614377 PKHD1P08F94 4074 aa1.18□□□□□ -2.22
CBWD3-209ENST00000614377 TENM3Q9P273 2699 aa1.17□□□□□ -2.22
CBWD3-209ENST00000614377 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
CBWD3-209ENST00000614377 TNXBP22105 4242 aa1.17□□□□□ -2.22
CBWD3-209ENST00000614377 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
CBWD3-209ENST00000614377 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
CBWD3-209ENST00000614377 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
CBWD3-209ENST00000614377 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
CBWD3-209ENST00000614377 PLECQ15149 4684 aaKnown RBP1.14□□□□□ -2.23
CBWD3-209ENST00000614377 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
CBWD3-209ENST00000614377 TNP1P09430 55 aa1.12□□□□□ -2.23
CBWD3-209ENST00000614377 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
CBWD3-209ENST00000614377 KRTAP20-1Q3LI63 56 aa1.12□□□□□ -2.23
CBWD3-209ENST00000614377 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
CBWD3-209ENST00000614377 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
CBWD3-209ENST00000614377 STAB2Q8WWQ8 2551 aa1.09□□□□□ -2.23
CBWD3-209ENST00000614377 RNF213Q63HN8 5207 aa1.09□□□□□ -2.23
CBWD3-209ENST00000614377 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
CBWD3-209ENST00000614377 LPAP08519 4548 aa1.08□□□□□ -2.24
CBWD3-209ENST00000614377 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
CBWD3-209ENST00000614377 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
CBWD3-209ENST00000614377 STARD9Q9P2P6 4700 aa1.06□□□□□ -2.24
CBWD3-209ENST00000614377 FAT1Q14517 4588 aa1.04□□□□□ -2.24
CBWD3-209ENST00000614377 MUC17Q685J3 4493 aa1.03□□□□□ -2.24
CBWD3-209ENST00000614377 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
CBWD3-209ENST00000614377 KRTAP12-3P60328 96 aa1.01□□□□□ -2.25
CBWD3-209ENST00000614377 M0R2T5 61 aa0.99□□□□□ -2.25
CBWD3-209ENST00000614377 SMR3BP02814 79 aaPredicted RBP0.99□□□□□ -2.25
CBWD3-209ENST00000614377 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
CBWD3-209ENST00000614377 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
CBWD3-209ENST00000614377 LCE3DQ9BYE3 92 aa0.94□□□□□ -2.26
CBWD3-209ENST00000614377 USH2AO75445 5202 aa0.93□□□□□ -2.26
CBWD3-209ENST00000614377 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
CBWD3-209ENST00000614377 LRP2P98164 4655 aa0.92□□□□□ -2.26
CBWD3-209ENST00000614377 PRM1P04553 51 aa0.9□□□□□ -2.26
CBWD3-209ENST00000614377 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
CBWD3-209ENST00000614377 FSIP2Q5CZC0 6907 aa0.9□□□□□ -2.27
CBWD3-209ENST00000614377 KMT2DO14686 5537 aa0.89□□□□□ -2.27
CBWD3-209ENST00000614377 MT1HL1P0DM35 61 aa0.89□□□□□ -2.27
CBWD3-209ENST00000614377 FCGBPQ9Y6R7 5405 aaPredicted RBP0.88□□□□□ -2.27
CBWD3-209ENST00000614377 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
CBWD3-209ENST00000614377 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
CBWD3-209ENST00000614377 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
CBWD3-209ENST00000614377 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
CBWD3-209ENST00000614377 MT1AP04731 61 aa0.85□□□□□ -2.27
CBWD3-209ENST00000614377 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.27
CBWD3-209ENST00000614377 MT1XP80297 61 aa0.8□□□□□ -2.28
CBWD3-209ENST00000614377 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CBWD3-209ENST00000614377 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
CBWD3-209ENST00000614377 MT1EP04732 61 aa0.78□□□□□ -2.28
CBWD3-209ENST00000614377 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
CBWD3-209ENST00000614377 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
CBWD3-209ENST00000614377 MT1HP80294 61 aa0.77□□□□□ -2.29
CBWD3-209ENST00000614377 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
CBWD3-209ENST00000614377 MT1LQ93083 61 aa0.74□□□□□ -2.29
CBWD3-209ENST00000614377 KRTAP4-1Q9BYQ7 146 aa0.74□□□□□ -2.29
CBWD3-209ENST00000614377 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
CBWD3-209ENST00000614377 SPRR2BP35325 72 aa0.73□□□□□ -2.29
CBWD3-209ENST00000614377 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
CBWD3-209ENST00000614377 MT1BP07438 61 aa0.72□□□□□ -2.29
CBWD3-209ENST00000614377 SPRR2DP22532 72 aa0.72□□□□□ -2.29
CBWD3-209ENST00000614377 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
CBWD3-209ENST00000614377 SPRR2EP22531 72 aa0.72□□□□□ -2.29
CBWD3-209ENST00000614377 SPRR2AP35326 72 aa0.72□□□□□ -2.29
CBWD3-209ENST00000614377 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
CBWD3-209ENST00000614377 MT1GP13640 62 aa0.64□□□□□ -2.31
CBWD3-209ENST00000614377 MT1FP04733 61 aa0.63□□□□□ -2.31
CBWD3-209ENST00000614377 MT2AP02795 61 aa0.62□□□□□ -2.31
CBWD3-209ENST00000614377 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
CBWD3-209ENST00000614377 MT1MQ8N339 61 aa0.59□□□□□ -2.32
CBWD3-209ENST00000614377 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
CBWD3-209ENST00000614377 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
CBWD3-209ENST00000614377 MT4P47944 62 aa0.55□□□□□ -2.32
CBWD3-209ENST00000614377 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 42.1 ms