RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	PP632	Q6XCG6	107 aa		5.93	□□□□□ -1.46
CCND3-222	ENST00000612455	MT1M	Q8N339	61 aa		5.91	□□□□□ -1.46
CCND3-222	ENST00000612455	PSPHP1	O15172	72 aa		5.89	□□□□□ -1.47
CCND3-222	ENST00000612455	KRTAP25-1	Q3LHN0	102 aa		5.82	□□□□□ -1.48
CCND3-222	ENST00000612455		K7ERS5	55 aa		5.81	□□□□□ -1.48
CCND3-222	ENST00000612455	KRTAP12-3	P60328	96 aa		5.81	□□□□□ -1.48
CCND3-222	ENST00000612455	GPR98	Q8WXG9	6306 aa		5.78	□□□□□ -1.48
CCND3-222	ENST00000612455	RPS28	P62857	69 aa	Known RBP	5.75	□□□□□ -1.49
CCND3-222	ENST00000612455	KRTAP4-3	Q9BYR4	195 aa		5.75	□□□□□ -1.49
CCND3-222	ENST00000612455	KRTAP4-9	Q9BYQ8	210 aa		5.72	□□□□□ -1.49
CCND3-222	ENST00000612455		A6NED7	52 aa		5.69	□□□□□ -1.5
CCND3-222	ENST00000612455	PCP4	P48539	62 aa		5.68	□□□□□ -1.5
CCND3-222	ENST00000612455	LCE4A	Q5TA78	99 aa		5.67	□□□□□ -1.5
CCND3-222	ENST00000612455	KRTAP23-1	A1A580	65 aa		5.66	□□□□□ -1.5
CCND3-222	ENST00000612455	KRTAP4-7	Q9BYR0	210 aa		5.66	□□□□□ -1.5
CCND3-222	ENST00000612455	KRTAP5-4	Q6L8H1	288 aa		5.62	□□□□□ -1.51
CCND3-222	ENST00000612455	LCE1D	Q5T752	114 aa		5.61	□□□□□ -1.51
CCND3-222	ENST00000612455	KRTAP19-4	Q3LI73	84 aa		5.57	□□□□□ -1.52
CCND3-222	ENST00000612455	MT4	P47944	62 aa		5.53	□□□□□ -1.52
CCND3-222	ENST00000612455	CDC42SE1	Q9NRR8	79 aa		5.53	□□□□□ -1.52
CCND3-222	ENST00000612455	HMCN1	Q96RW7	5635 aa		5.51	□□□□□ -1.53
CCND3-222	ENST00000612455	KRTAP15-1	Q3LI76	137 aa		5.48	□□□□□ -1.53
CCND3-222	ENST00000612455	ROMO1	P60602	79 aa		5.47	□□□□□ -1.53
CCND3-222	ENST00000612455	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.44	□□□□□ -1.54
CCND3-222	ENST00000612455	KRTAP4-6	Q9BYQ5	205 aa		5.44	□□□□□ -1.54
CCND3-222	ENST00000612455	LCE3C	Q5T5A8	94 aa		5.38	□□□□□ -1.55
CCND3-222	ENST00000612455	LOC100996750	A0A140TA64	210 aa		5.35	□□□□□ -1.55
CCND3-222	ENST00000612455	AHNAK2	Q8IVF2	5795 aa		5.32	□□□□□ -1.56
CCND3-222	ENST00000612455	SPRR5	A0A1B0GTR4	108 aa		5.27	□□□□□ -1.57
CCND3-222	ENST00000612455	KRTAP20-2	Q3LI61	65 aa		5.26	□□□□□ -1.57
CCND3-222	ENST00000612455	KRTAP5-10	Q6L8G5	202 aa		5.24	□□□□□ -1.57
CCND3-222	ENST00000612455	KRTAP12-4	P60329	112 aa		5.23	□□□□□ -1.57
CCND3-222	ENST00000612455	SYNE1	Q8NF91	8797 aa	Known RBP	5.22	□□□□□ -1.57
CCND3-222	ENST00000612455	KRTAP5-3	Q6L8H2	238 aa		5.13	□□□□□ -1.59
CCND3-222	ENST00000612455	KRTAP9-6	A8MVA2	160 aa		5.09	□□□□□ -1.59
CCND3-222	ENST00000612455	MT1A	P04731	61 aa		5.08	□□□□□ -1.6
CCND3-222	ENST00000612455	KRTAP5-7	Q6L8G8	165 aa		5.06	□□□□□ -1.6
CCND3-222	ENST00000612455	KRTAP6-1	Q3LI64	71 aa		5.04	□□□□□ -1.6
CCND3-222	ENST00000612455	BRK1	Q8WUW1	75 aa		4.95	□□□□□ -1.62
CCND3-222	ENST00000612455	KRTAP5-2	Q701N4	177 aa		4.94	□□□□□ -1.62
CCND3-222	ENST00000612455	KRTAP9-4	Q9BYQ2	154 aa		4.92	□□□□□ -1.62
CCND3-222	ENST00000612455	KRTAP6-2	Q3LI66	62 aa		4.78	□□□□□ -1.64
CCND3-222	ENST00000612455	KRTAP4-11	Q9BYQ6	195 aa		4.78	□□□□□ -1.64
CCND3-222	ENST00000612455	PMAIP1	Q13794	54 aa		4.68	□□□□□ -1.66
CCND3-222	ENST00000612455	KRTAP5-8	O75690	187 aa		4.63	□□□□□ -1.67
CCND3-222	ENST00000612455	MT3	P25713	68 aa		4.63	□□□□□ -1.67
CCND3-222	ENST00000612455	OBSCN	Q5VST9	7968 aa		4.6	□□□□□ -1.67
CCND3-222	ENST00000612455	PRAC1	Q96KF2	57 aa		4.49	□□□□□ -1.69
CCND3-222	ENST00000612455	MUC5AC	P98088	5654 aa		4.45	□□□□□ -1.7
CCND3-222	ENST00000612455	AHNAK	Q09666	5890 aa	Known RBP	4.44	□□□□□ -1.7
CCND3-222	ENST00000612455	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.41	□□□□□ -1.7
CCND3-222	ENST00000612455	KRTAP5-1	Q6L8H4	278 aa		4.4	□□□□□ -1.71
CCND3-222	ENST00000612455	PRO0628	Q9UI54	55 aa		4.4	□□□□□ -1.71
CCND3-222	ENST00000612455	KRTAP9-9	Q9BYP9	154 aa		4.33	□□□□□ -1.72
CCND3-222	ENST00000612455	LCE1E	Q5T753	118 aa		4.27	□□□□□ -1.73
CCND3-222	ENST00000612455	KTN1-AS1	Q86SY8	53 aa		4.18	□□□□□ -1.74
CCND3-222	ENST00000612455	KRTAP4-2	Q9BYR5	136 aa		4.01	□□□□□ -1.77
CCND3-222	ENST00000612455	LCE1C	Q5T751	118 aa		3.95	□□□□□ -1.78
CCND3-222	ENST00000612455	LCE1B	Q5T7P3	118 aa		3.95	□□□□□ -1.78
CCND3-222	ENST00000612455	SVIP	Q8NHG7	77 aa		3.93	□□□□□ -1.78
CCND3-222	ENST00000612455	LCE3D	Q9BYE3	92 aa		3.89	□□□□□ -1.79
CCND3-222	ENST00000612455	KRTAP4-12	Q9BQ66	201 aa		3.88	□□□□□ -1.79
CCND3-222	ENST00000612455	LUZP6	Q538Z0	58 aa		3.77	□□□□□ -1.81
CCND3-222	ENST00000612455	LCE3E	Q5T5B0	92 aa		3.68	□□□□□ -1.82
CCND3-222	ENST00000612455	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.63	□□□□□ -1.83
CCND3-222	ENST00000612455	KRTAP5-11	Q6L8G4	156 aa		3.56	□□□□□ -1.84
CCND3-222	ENST00000612455	LCE1F	Q5T754	118 aa		3.46	□□□□□ -1.86
CCND3-222	ENST00000612455		H3BS24	57 aa		3.42	□□□□□ -1.86
CCND3-222	ENST00000612455	KRTAP21-2	Q3LI59	83 aa		3.34	□□□□□ -1.87
CCND3-222	ENST00000612455	PHGR1	C9JFL3	82 aa		3.07	□□□□□ -1.92
CCND3-222	ENST00000612455	NDUFAF8	A1L188	74 aa		3.06	□□□□□ -1.92
CCND3-222	ENST00000612455	KRTAP4-4	Q9BYR3	166 aa		2.99	□□□□□ -1.93
CCND3-222	ENST00000612455	MUC19	Q7Z5P9	8384 aa		2.82	□□□□□ -1.96
CCND3-222	ENST00000612455	PRM1	P04553	51 aa		2.79	□□□□□ -1.96
CCND3-222	ENST00000612455		A0A0A0MQY5	61 aa		2.69	□□□□□ -1.98
CCND3-222	ENST00000612455	INE1	O15225	51 aa		2.5	□□□□□ -2.01
CCND3-222	ENST00000612455	KRTAP21-1	Q3LI58	79 aa		2.31	□□□□□ -2.04
CCND3-222	ENST00000612455	MUC16	Q8WXI7	14507 aa		2	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 41.8 ms