RNA–Protein interactions for RNA: ENST00000611553.4

CBWD6-211, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-211ENST00000611553 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
CBWD6-211ENST00000611553 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
CBWD6-211ENST00000611553 HMCN2Q8NDA2 5059 aa1.51□□□□□ -2.17
CBWD6-211ENST00000611553 FLNAP21333 2647 aaKnown RBP1.51□□□□□ -2.17
CBWD6-211ENST00000611553 MAST4O15021 2626 aa1.5□□□□□ -2.17
CBWD6-211ENST00000611553 ACACBO00763 2458 aa1.5□□□□□ -2.17
CBWD6-211ENST00000611553 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
CBWD6-211ENST00000611553 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
CBWD6-211ENST00000611553 NSD1Q96L73 2696 aaPredicted RBP1.5□□□□□ -2.17
CBWD6-211ENST00000611553 MUC2Q02817 5179 aa1.49□□□□□ -2.17
CBWD6-211ENST00000611553 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
CBWD6-211ENST00000611553 LPAP08519 4548 aa1.49□□□□□ -2.17
CBWD6-211ENST00000611553 IGSF10Q6WRI0 2623 aa1.48□□□□□ -2.17
CBWD6-211ENST00000611553 STAB1Q9NY15 2570 aa1.48□□□□□ -2.17
CBWD6-211ENST00000611553 MGAM2Q2M2H8 2515 aa1.48□□□□□ -2.17
CBWD6-211ENST00000611553 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
CBWD6-211ENST00000611553 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
CBWD6-211ENST00000611553 FAT1Q14517 4588 aa1.46□□□□□ -2.18
CBWD6-211ENST00000611553 FLNBO75369 2602 aaKnown RBP1.44□□□□□ -2.18
CBWD6-211ENST00000611553 LCE3EQ5T5B0 92 aa1.44□□□□□ -2.18
CBWD6-211ENST00000611553 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
CBWD6-211ENST00000611553 MUC17Q685J3 4493 aa1.42□□□□□ -2.18
CBWD6-211ENST00000611553 UBR4Q5T4S7 5183 aa1.42□□□□□ -2.18
CBWD6-211ENST00000611553 M0R2T5 61 aa1.41□□□□□ -2.18
CBWD6-211ENST00000611553 LCE3AQ5TA76 89 aa1.41□□□□□ -2.18
CBWD6-211ENST00000611553 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
CBWD6-211ENST00000611553 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
CBWD6-211ENST00000611553 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
CBWD6-211ENST00000611553 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
CBWD6-211ENST00000611553 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
CBWD6-211ENST00000611553 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
CBWD6-211ENST00000611553 LRP2P98164 4655 aa1.28□□□□□ -2.21
CBWD6-211ENST00000611553 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
CBWD6-211ENST00000611553 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
CBWD6-211ENST00000611553 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
CBWD6-211ENST00000611553 PRM1P04553 51 aa1.21□□□□□ -2.22
CBWD6-211ENST00000611553 KMT2DO14686 5537 aa1.18□□□□□ -2.22
CBWD6-211ENST00000611553 MT1AP04731 61 aa1.14□□□□□ -2.23
CBWD6-211ENST00000611553 MT1XP80297 61 aa1.14□□□□□ -2.23
CBWD6-211ENST00000611553 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
CBWD6-211ENST00000611553 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
CBWD6-211ENST00000611553 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
CBWD6-211ENST00000611553 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
CBWD6-211ENST00000611553 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
CBWD6-211ENST00000611553 MT1EP04732 61 aa1.08□□□□□ -2.24
CBWD6-211ENST00000611553 RNF213Q63HN8 5207 aa1.06□□□□□ -2.24
CBWD6-211ENST00000611553 USH2AO75445 5202 aa1.06□□□□□ -2.24
CBWD6-211ENST00000611553 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
CBWD6-211ENST00000611553 MT1BP07438 61 aa1.05□□□□□ -2.24
CBWD6-211ENST00000611553 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
CBWD6-211ENST00000611553 MT1HL1P0DM35 61 aa1.05□□□□□ -2.24
CBWD6-211ENST00000611553 KRTAP19-6Q3LI70 58 aa1.04□□□□□ -2.24
CBWD6-211ENST00000611553 MT1LQ93083 61 aa1.03□□□□□ -2.24
CBWD6-211ENST00000611553 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.25
CBWD6-211ENST00000611553 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
CBWD6-211ENST00000611553 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
CBWD6-211ENST00000611553 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
CBWD6-211ENST00000611553 FSIP2Q5CZC0 6907 aa1□□□□□ -2.25
CBWD6-211ENST00000611553 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
CBWD6-211ENST00000611553 SPRR2DP22532 72 aa0.99□□□□□ -2.25
CBWD6-211ENST00000611553 SPRR2AP35326 72 aa0.97□□□□□ -2.25
CBWD6-211ENST00000611553 SPRR2BP35325 72 aa0.97□□□□□ -2.25
CBWD6-211ENST00000611553 MT1FP04733 61 aa0.94□□□□□ -2.26
CBWD6-211ENST00000611553 MT2AP02795 61 aa0.93□□□□□ -2.26
CBWD6-211ENST00000611553 SPRR2EP22531 72 aa0.92□□□□□ -2.26
CBWD6-211ENST00000611553 MT1HP80294 61 aa0.91□□□□□ -2.26
CBWD6-211ENST00000611553 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
CBWD6-211ENST00000611553 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
CBWD6-211ENST00000611553 MT1GP13640 62 aa0.9□□□□□ -2.27
CBWD6-211ENST00000611553 MT1MQ8N339 61 aa0.85□□□□□ -2.27
CBWD6-211ENST00000611553 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
CBWD6-211ENST00000611553 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
CBWD6-211ENST00000611553 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
CBWD6-211ENST00000611553 MUC12Q9UKN1 5478 aa0.7□□□□□ -2.3
CBWD6-211ENST00000611553 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
CBWD6-211ENST00000611553 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
CBWD6-211ENST00000611553 DSTQ03001 7570 aaKnown RBP0.53□□□□□ -2.32
CBWD6-211ENST00000611553 MT4P47944 62 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms