RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 MT1EP04732 61 aa5.85□□□□□ -1.47
EWSR1-221ENST00000610553 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
EWSR1-221ENST00000610553 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
EWSR1-221ENST00000610553 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
EWSR1-221ENST00000610553 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
EWSR1-221ENST00000610553 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
EWSR1-221ENST00000610553 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
EWSR1-221ENST00000610553 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
EWSR1-221ENST00000610553 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
EWSR1-221ENST00000610553 MT1GP13640 62 aa5.47□□□□□ -1.53
EWSR1-221ENST00000610553 MT1MQ8N339 61 aa5.45□□□□□ -1.54
EWSR1-221ENST00000610553 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
EWSR1-221ENST00000610553 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
EWSR1-221ENST00000610553 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
EWSR1-221ENST00000610553 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
EWSR1-221ENST00000610553 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
EWSR1-221ENST00000610553 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
EWSR1-221ENST00000610553 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
EWSR1-221ENST00000610553 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
EWSR1-221ENST00000610553 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
EWSR1-221ENST00000610553 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
EWSR1-221ENST00000610553 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
EWSR1-221ENST00000610553 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
EWSR1-221ENST00000610553 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
EWSR1-221ENST00000610553 MT1AP04731 61 aa5.01□□□□□ -1.61
EWSR1-221ENST00000610553 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
EWSR1-221ENST00000610553 SPRR2EP22531 72 aa4.99□□□□□ -1.61
EWSR1-221ENST00000610553 SPRR2BP35325 72 aa4.99□□□□□ -1.61
EWSR1-221ENST00000610553 SPRR2AP35326 72 aa4.99□□□□□ -1.61
EWSR1-221ENST00000610553 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
EWSR1-221ENST00000610553 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
EWSR1-221ENST00000610553 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
EWSR1-221ENST00000610553 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
EWSR1-221ENST00000610553 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.64
EWSR1-221ENST00000610553 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
EWSR1-221ENST00000610553 SPRR2DP22532 72 aa4.79□□□□□ -1.64
EWSR1-221ENST00000610553 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
EWSR1-221ENST00000610553 NEBP20929 6669 aa4.69□□□□□ -1.66
EWSR1-221ENST00000610553 PRM1P04553 51 aa4.66□□□□□ -1.66
EWSR1-221ENST00000610553 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
EWSR1-221ENST00000610553 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
EWSR1-221ENST00000610553 MT3P25713 68 aa4.4□□□□□ -1.71
EWSR1-221ENST00000610553 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
EWSR1-221ENST00000610553 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
EWSR1-221ENST00000610553 MT4P47944 62 aa4.24□□□□□ -1.73
EWSR1-221ENST00000610553 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
EWSR1-221ENST00000610553 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
EWSR1-221ENST00000610553 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
EWSR1-221ENST00000610553 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
EWSR1-221ENST00000610553 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
EWSR1-221ENST00000610553 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
EWSR1-221ENST00000610553 LCE1DQ5T752 114 aa4.09□□□□□ -1.76
EWSR1-221ENST00000610553 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
EWSR1-221ENST00000610553 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
EWSR1-221ENST00000610553 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.77
EWSR1-221ENST00000610553 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
EWSR1-221ENST00000610553 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
EWSR1-221ENST00000610553 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
EWSR1-221ENST00000610553 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
EWSR1-221ENST00000610553 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
EWSR1-221ENST00000610553 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
EWSR1-221ENST00000610553 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
EWSR1-221ENST00000610553 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
EWSR1-221ENST00000610553 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
EWSR1-221ENST00000610553 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
EWSR1-221ENST00000610553 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
EWSR1-221ENST00000610553 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
EWSR1-221ENST00000610553 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
EWSR1-221ENST00000610553 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
EWSR1-221ENST00000610553 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
EWSR1-221ENST00000610553 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
EWSR1-221ENST00000610553 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
EWSR1-221ENST00000610553 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
EWSR1-221ENST00000610553 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
EWSR1-221ENST00000610553 LCE1FQ5T754 118 aa2.54□□□□□ -2
EWSR1-221ENST00000610553 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
EWSR1-221ENST00000610553 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
EWSR1-221ENST00000610553 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 94.4 ms