RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, human

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-221	ENST00000610553	MT1E	P04732	61 aa		5.85	□□□□□ -1.47
EWSR1-221	ENST00000610553	LCE2D	Q5TA82	110 aa	Predicted RBP	5.85	□□□□□ -1.47
EWSR1-221	ENST00000610553	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.84	□□□□□ -1.47
EWSR1-221	ENST00000610553	KRTAP9-2	Q9BYQ4	174 aa		5.64	□□□□□ -1.51
EWSR1-221	ENST00000610553	MUC12	Q9UKN1	5478 aa		5.62	□□□□□ -1.51
EWSR1-221	ENST00000610553	MACF1	Q9UPN3	7388 aa	Known RBP	5.61	□□□□□ -1.51
EWSR1-221	ENST00000610553	LOC100996750	A0A140TA64	210 aa		5.53	□□□□□ -1.52
EWSR1-221	ENST00000610553	KRTAP4-3	Q9BYR4	195 aa		5.52	□□□□□ -1.53
EWSR1-221	ENST00000610553	SYNE2	Q8WXH0	6885 aa	Known RBP	5.51	□□□□□ -1.53
EWSR1-221	ENST00000610553	MT1G	P13640	62 aa		5.47	□□□□□ -1.53
EWSR1-221	ENST00000610553	MT1M	Q8N339	61 aa		5.45	□□□□□ -1.54
EWSR1-221	ENST00000610553	CRCT1	Q9UGL9	99 aa		5.44	□□□□□ -1.54
EWSR1-221	ENST00000610553	KRTAP19-3	Q7Z4W3	81 aa		5.43	□□□□□ -1.54
EWSR1-221	ENST00000610553	SPRR2F	Q96RM1	72 aa		5.36	□□□□□ -1.55
EWSR1-221	ENST00000610553	MDN1	Q9NU22	5596 aa		5.34	□□□□□ -1.55
EWSR1-221	ENST00000610553	DST	Q03001	7570 aa	Known RBP	5.3	□□□□□ -1.56
EWSR1-221	ENST00000610553	LCE5A	Q5TCM9	118 aa		5.24	□□□□□ -1.57
EWSR1-221	ENST00000610553	KRTAP12-4	P60329	112 aa		5.24	□□□□□ -1.57
EWSR1-221	ENST00000610553	KRTAP4-6	Q9BYQ5	205 aa		5.17	□□□□□ -1.58
EWSR1-221	ENST00000610553	KRTAP5-9	P26371	169 aa		5.13	□□□□□ -1.59
EWSR1-221	ENST00000610553	LCE3B	Q5TA77	95 aa		5.09	□□□□□ -1.59
EWSR1-221	ENST00000610553	LCE1A	Q5T7P2	110 aa		5.06	□□□□□ -1.6
EWSR1-221	ENST00000610553	KRTAP9-6	A0A140TA67	174 aa		5.05	□□□□□ -1.6
EWSR1-221	ENST00000610553	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.05	□□□□□ -1.6
EWSR1-221	ENST00000610553	MT1A	P04731	61 aa		5.01	□□□□□ -1.61
EWSR1-221	ENST00000610553	KRTAP4-9	Q9BYQ8	210 aa		5.01	□□□□□ -1.61
EWSR1-221	ENST00000610553	SPRR2E	P22531	72 aa		4.99	□□□□□ -1.61
EWSR1-221	ENST00000610553	SPRR2B	P35325	72 aa		4.99	□□□□□ -1.61
EWSR1-221	ENST00000610553	SPRR2A	P35326	72 aa		4.99	□□□□□ -1.61
EWSR1-221	ENST00000610553	KRTAP6-1	Q3LI64	71 aa		4.98	□□□□□ -1.61
EWSR1-221	ENST00000610553	SYNE1	Q8NF91	8797 aa	Known RBP	4.92	□□□□□ -1.62
EWSR1-221	ENST00000610553	KRTAP6-3	Q3LI67	103 aa		4.89	□□□□□ -1.63
EWSR1-221	ENST00000610553	LCE3D	Q9BYE3	92 aa		4.85	□□□□□ -1.63
EWSR1-221	ENST00000610553	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.84	□□□□□ -1.64
EWSR1-221	ENST00000610553	LCE3E	Q5T5B0	92 aa		4.8	□□□□□ -1.64
EWSR1-221	ENST00000610553	SPRR2D	P22532	72 aa		4.79	□□□□□ -1.64
EWSR1-221	ENST00000610553	KRTAP9-7	A8MTY7	169 aa		4.71	□□□□□ -1.66
EWSR1-221	ENST00000610553	NEB	P20929	6669 aa		4.69	□□□□□ -1.66
EWSR1-221	ENST00000610553	PRM1	P04553	51 aa		4.66	□□□□□ -1.66
EWSR1-221	ENST00000610553	KRTAP9-4	Q9BYQ2	154 aa		4.61	□□□□□ -1.67
EWSR1-221	ENST00000610553	KRTAP6-2	Q3LI66	62 aa		4.5	□□□□□ -1.69
EWSR1-221	ENST00000610553	MT3	P25713	68 aa		4.4	□□□□□ -1.71
EWSR1-221	ENST00000610553	OBSCN	Q5VST9	7968 aa		4.4	□□□□□ -1.71
EWSR1-221	ENST00000610553	KRTAP5-4	Q6L8H1	288 aa		4.33	□□□□□ -1.72
EWSR1-221	ENST00000610553	MT4	P47944	62 aa		4.24	□□□□□ -1.73
EWSR1-221	ENST00000610553	HMCN1	Q96RW7	5635 aa		4.2	□□□□□ -1.74
EWSR1-221	ENST00000610553	KRTAP2-2	Q9BYT5	123 aa		4.16	□□□□□ -1.74
EWSR1-221	ENST00000610553	LCE4A	Q5TA78	99 aa		4.13	□□□□□ -1.75
EWSR1-221	ENST00000610553	KRTAP20-1	Q3LI63	56 aa		4.12	□□□□□ -1.75
EWSR1-221	ENST00000610553	KRTAP9-9	Q9BYP9	154 aa		4.12	□□□□□ -1.75
EWSR1-221	ENST00000610553	KRTAP20-2	Q3LI61	65 aa		4.09	□□□□□ -1.75
EWSR1-221	ENST00000610553	LCE1D	Q5T752	114 aa		4.09	□□□□□ -1.76
EWSR1-221	ENST00000610553	KRTAP5-3	Q6L8H2	238 aa		4.06	□□□□□ -1.76
EWSR1-221	ENST00000610553	KRTAP4-12	Q9BQ66	201 aa		3.99	□□□□□ -1.77
EWSR1-221	ENST00000610553	KRTAP5-2	Q701N4	177 aa		3.96	□□□□□ -1.77
EWSR1-221	ENST00000610553	KRTAP4-2	Q9BYR5	136 aa		3.94	□□□□□ -1.78
EWSR1-221	ENST00000610553	MUC5AC	P98088	5654 aa		3.76	□□□□□ -1.81
EWSR1-221	ENST00000610553	KRTAP4-11	Q9BYQ6	195 aa		3.65	□□□□□ -1.82
EWSR1-221	ENST00000610553	LCE1E	Q5T753	118 aa		3.58	□□□□□ -1.84
EWSR1-221	ENST00000610553	KRTAP5-10	Q6L8G5	202 aa		3.56	□□□□□ -1.84
EWSR1-221	ENST00000610553	KRTAP5-1	Q6L8H4	278 aa		3.52	□□□□□ -1.85
EWSR1-221	ENST00000610553	AHNAK2	Q8IVF2	5795 aa		3.5	□□□□□ -1.85
EWSR1-221	ENST00000610553	LCE1B	Q5T7P3	118 aa		3.5	□□□□□ -1.85
EWSR1-221	ENST00000610553	LCE1C	Q5T751	118 aa		3.39	□□□□□ -1.87
EWSR1-221	ENST00000610553	KRTAP5-8	O75690	187 aa		3.36	□□□□□ -1.87
EWSR1-221	ENST00000610553	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.23	□□□□□ -1.89
EWSR1-221	ENST00000610553	KRTAP21-2	Q3LI59	83 aa		3.22	□□□□□ -1.89
EWSR1-221	ENST00000610553	KRTAP5-7	Q6L8G8	165 aa		3.2	□□□□□ -1.9
EWSR1-221	ENST00000610553	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.11	□□□□□ -1.91
EWSR1-221	ENST00000610553	GPR98	Q8WXG9	6306 aa		3.09	□□□□□ -1.92
EWSR1-221	ENST00000610553	KRTAP21-1	Q3LI58	79 aa		2.97	□□□□□ -1.93
EWSR1-221	ENST00000610553	KRTAP5-11	Q6L8G4	156 aa		2.91	□□□□□ -1.94
EWSR1-221	ENST00000610553	KRTAP4-4	Q9BYR3	166 aa		2.9	□□□□□ -1.95
EWSR1-221	ENST00000610553	MUC19	Q7Z5P9	8384 aa		2.78	□□□□□ -1.96
EWSR1-221	ENST00000610553	LCE1F	Q5T754	118 aa		2.54	□□□□□ -2
EWSR1-221	ENST00000610553	AHNAK	Q09666	5890 aa	Known RBP	2.53	□□□□□ -2
EWSR1-221	ENST00000610553	PHGR1	C9JFL3	82 aa		2.51	□□□□□ -2.01
EWSR1-221	ENST00000610553	MUC16	Q8WXI7	14507 aa		1.69	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 61.7 ms