RNA–Protein interactions for RNA: ENST00000604103.1

FOCAD-212, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-212ENST00000604103 TMEM167AQ8TBQ9 72 aa1.65□□□□□ -2.15
FOCAD-212ENST00000604103 NOP10Q9NPE3 64 aaKnown RBP1.65□□□□□ -2.15
FOCAD-212ENST00000604103 K7EIM0 57 aa1.63□□□□□ -2.15
FOCAD-212ENST00000604103 KRTAP10-4P60372 401 aaPredicted RBP1.63□□□□□ -2.15
FOCAD-212ENST00000604103 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
FOCAD-212ENST00000604103 RPL39P5Q59GN2 51 aa1.6□□□□□ -2.15
FOCAD-212ENST00000604103 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
FOCAD-212ENST00000604103 USH2AO75445 5202 aa1.59□□□□□ -2.15
FOCAD-212ENST00000604103 NEBP20929 6669 aa1.59□□□□□ -2.16
FOCAD-212ENST00000604103 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
FOCAD-212ENST00000604103 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
FOCAD-212ENST00000604103 DEFB4AO15263 64 aa1.57□□□□□ -2.16
FOCAD-212ENST00000604103 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
FOCAD-212ENST00000604103 MUC17Q685J3 4493 aa1.55□□□□□ -2.16
FOCAD-212ENST00000604103 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
FOCAD-212ENST00000604103 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
FOCAD-212ENST00000604103 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
FOCAD-212ENST00000604103 M0QZ58 72 aa1.46□□□□□ -2.18
FOCAD-212ENST00000604103 HTN3P15516 51 aa1.46□□□□□ -2.18
FOCAD-212ENST00000604103 SPART-AS1P0CW21 52 aa1.45□□□□□ -2.18
FOCAD-212ENST00000604103 KMT2DO14686 5537 aa1.45□□□□□ -2.18
FOCAD-212ENST00000604103 MT1HP80294 61 aa1.44□□□□□ -2.18
FOCAD-212ENST00000604103 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
FOCAD-212ENST00000604103 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
FOCAD-212ENST00000604103 APELAP0DMC3 54 aa1.41□□□□□ -2.18
FOCAD-212ENST00000604103 KRTAP19-2Q3LHN2 52 aa1.41□□□□□ -2.18
FOCAD-212ENST00000604103 MDN1Q9NU22 5596 aa1.4□□□□□ -2.19
FOCAD-212ENST00000604103 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.19
FOCAD-212ENST00000604103 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
FOCAD-212ENST00000604103 A0A096LPF7 62 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 H3BNG1 76 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 M0R2T5 61 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 SPINK6Q6UWN8 80 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 RHPN1-AS1Q9BWJ2 59 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 KRTAP2-1Q9BYU5 128 aa1.36□□□□□ -2.19
FOCAD-212ENST00000604103 DEFB1P60022 68 aa1.34□□□□□ -2.19
FOCAD-212ENST00000604103 TNP1P09430 55 aa1.33□□□□□ -2.2
FOCAD-212ENST00000604103 HTN1P15515 57 aa1.32□□□□□ -2.2
FOCAD-212ENST00000604103 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
FOCAD-212ENST00000604103 LINC01556Q5JQF7 62 aa1.31□□□□□ -2.2
FOCAD-212ENST00000604103 C9orf92A6NGG3 77 aa1.28□□□□□ -2.2
FOCAD-212ENST00000604103 A0A096LNI7 61 aa1.27□□□□□ -2.21
FOCAD-212ENST00000604103 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
FOCAD-212ENST00000604103 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
FOCAD-212ENST00000604103 MT2AP02795 61 aa1.25□□□□□ -2.21
FOCAD-212ENST00000604103 MT1FP04733 61 aa1.24□□□□□ -2.21
FOCAD-212ENST00000604103 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
FOCAD-212ENST00000604103 SPRR2EP22531 72 aa1.23□□□□□ -2.21
FOCAD-212ENST00000604103 SPRR2BP35325 72 aa1.23□□□□□ -2.21
FOCAD-212ENST00000604103 SPRR2AP35326 72 aa1.23□□□□□ -2.21
FOCAD-212ENST00000604103 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
FOCAD-212ENST00000604103 SPRR2DP22532 72 aa1.2□□□□□ -2.22
FOCAD-212ENST00000604103 SPRR2FQ96RM1 72 aa1.17□□□□□ -2.22
FOCAD-212ENST00000604103 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
FOCAD-212ENST00000604103 PRM1P04553 51 aa1.16□□□□□ -2.22
FOCAD-212ENST00000604103 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
FOCAD-212ENST00000604103 MT4P47944 62 aa1.08□□□□□ -2.24
FOCAD-212ENST00000604103 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
FOCAD-212ENST00000604103 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
FOCAD-212ENST00000604103 MT1BP07438 61 aa1.05□□□□□ -2.24
FOCAD-212ENST00000604103 RPS29P62273 56 aaKnown RBP1.04□□□□□ -2.24
FOCAD-212ENST00000604103 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
FOCAD-212ENST00000604103 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
FOCAD-212ENST00000604103 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
FOCAD-212ENST00000604103 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
FOCAD-212ENST00000604103 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
FOCAD-212ENST00000604103 MT1AP04731 61 aa0.91□□□□□ -2.26
FOCAD-212ENST00000604103 MT1XP80297 61 aa0.9□□□□□ -2.27
FOCAD-212ENST00000604103 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
FOCAD-212ENST00000604103 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
FOCAD-212ENST00000604103 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
FOCAD-212ENST00000604103 MT1EP04732 61 aa0.82□□□□□ -2.28
FOCAD-212ENST00000604103 KRTAP19-7Q3SYF9 63 aa0.81□□□□□ -2.28
FOCAD-212ENST00000604103 MT1GP13640 62 aa0.8□□□□□ -2.28
FOCAD-212ENST00000604103 MT1MQ8N339 61 aa0.8□□□□□ -2.28
FOCAD-212ENST00000604103 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
FOCAD-212ENST00000604103 MT1LQ93083 61 aa0.71□□□□□ -2.3
FOCAD-212ENST00000604103 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 168.9 ms