RNA–Protein interactions for RNA: ENST00000604103.1

FOCAD-212, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-212ENST00000604103 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
FOCAD-212ENST00000604103 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
FOCAD-212ENST00000604103 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
FOCAD-212ENST00000604103 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
FOCAD-212ENST00000604103 FOXD1Q16676 465 aa18.58■□□□□ 0.56
FOCAD-212ENST00000604103 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
FOCAD-212ENST00000604103 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
FOCAD-212ENST00000604103 ADRA2BP18089 450 aa17.62■□□□□ 0.41
FOCAD-212ENST00000604103 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
FOCAD-212ENST00000604103 MSH5O43196 834 aa17.21■□□□□ 0.35
FOCAD-212ENST00000604103 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
FOCAD-212ENST00000604103 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
FOCAD-212ENST00000604103 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
FOCAD-212ENST00000604103 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
FOCAD-212ENST00000604103 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
FOCAD-212ENST00000604103 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
FOCAD-212ENST00000604103 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
FOCAD-212ENST00000604103 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
FOCAD-212ENST00000604103 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
FOCAD-212ENST00000604103 KCNA4P22459 653 aa15.32■□□□□ 0.04
FOCAD-212ENST00000604103 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
FOCAD-212ENST00000604103 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
FOCAD-212ENST00000604103 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
FOCAD-212ENST00000604103 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
FOCAD-212ENST00000604103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
FOCAD-212ENST00000604103 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
FOCAD-212ENST00000604103 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
FOCAD-212ENST00000604103 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
FOCAD-212ENST00000604103 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
FOCAD-212ENST00000604103 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
FOCAD-212ENST00000604103 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
FOCAD-212ENST00000604103 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
FOCAD-212ENST00000604103 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
FOCAD-212ENST00000604103 CAPN15O75808 1086 aa14.11□□□□□ -0.15
FOCAD-212ENST00000604103 ZBTB22O15209 634 aa14.1□□□□□ -0.15
FOCAD-212ENST00000604103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
FOCAD-212ENST00000604103 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
FOCAD-212ENST00000604103 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
FOCAD-212ENST00000604103 APLP2Q06481 763 aa14.02□□□□□ -0.17
FOCAD-212ENST00000604103 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
FOCAD-212ENST00000604103 DSG3P32926 999 aa13.92□□□□□ -0.18
FOCAD-212ENST00000604103 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
FOCAD-212ENST00000604103 ABCB7O75027 752 aa13.85□□□□□ -0.19
FOCAD-212ENST00000604103 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
FOCAD-212ENST00000604103 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
FOCAD-212ENST00000604103 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
FOCAD-212ENST00000604103 POLA2Q14181 598 aa13.65□□□□□ -0.22
FOCAD-212ENST00000604103 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
FOCAD-212ENST00000604103 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
FOCAD-212ENST00000604103 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
FOCAD-212ENST00000604103 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
FOCAD-212ENST00000604103 FBLN2P98095 1184 aa13.2□□□□□ -0.3
FOCAD-212ENST00000604103 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
FOCAD-212ENST00000604103 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
FOCAD-212ENST00000604103 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
FOCAD-212ENST00000604103 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
FOCAD-212ENST00000604103 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
FOCAD-212ENST00000604103 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
FOCAD-212ENST00000604103 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
FOCAD-212ENST00000604103 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
FOCAD-212ENST00000604103 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
FOCAD-212ENST00000604103 POTEHQ6S545 545 aa12.81□□□□□ -0.36
FOCAD-212ENST00000604103 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
FOCAD-212ENST00000604103 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
FOCAD-212ENST00000604103 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
FOCAD-212ENST00000604103 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
FOCAD-212ENST00000604103 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
FOCAD-212ENST00000604103 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
FOCAD-212ENST00000604103 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
FOCAD-212ENST00000604103 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
FOCAD-212ENST00000604103 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
FOCAD-212ENST00000604103 FKBP8Q14318 412 aa12.46□□□□□ -0.41
FOCAD-212ENST00000604103 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
FOCAD-212ENST00000604103 PROM2Q8N271 834 aa12.43□□□□□ -0.42
FOCAD-212ENST00000604103 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
FOCAD-212ENST00000604103 HAX1O00165 279 aa12.32□□□□□ -0.44
FOCAD-212ENST00000604103 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
FOCAD-212ENST00000604103 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-212ENST00000604103 EVX2Q03828 476 aa12.21□□□□□ -0.45
FOCAD-212ENST00000604103 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
FOCAD-212ENST00000604103 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
FOCAD-212ENST00000604103 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
FOCAD-212ENST00000604103 MIER1Q8N108 512 aa12.1□□□□□ -0.47
FOCAD-212ENST00000604103 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
FOCAD-212ENST00000604103 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
FOCAD-212ENST00000604103 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
FOCAD-212ENST00000604103 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
FOCAD-212ENST00000604103 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
FOCAD-212ENST00000604103 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
FOCAD-212ENST00000604103 GABBR2O75899 941 aa11.93□□□□□ -0.5
FOCAD-212ENST00000604103 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
FOCAD-212ENST00000604103 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
FOCAD-212ENST00000604103 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
FOCAD-212ENST00000604103 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
FOCAD-212ENST00000604103 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
FOCAD-212ENST00000604103 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
FOCAD-212ENST00000604103 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
FOCAD-212ENST00000604103 NUBP1P53384 320 aa11.81□□□□□ -0.52
FOCAD-212ENST00000604103 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
FOCAD-212ENST00000604103 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms