RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190		J3QR89	54 aa		5.86	□□□□□ -1.47
IRF3-231	ENST00000602190	KRTAP12-3	P60328	96 aa		5.86	□□□□□ -1.47
IRF3-231	ENST00000602190	KRTAP4-11	Q9BYQ6	195 aa		5.85	□□□□□ -1.47
IRF3-231	ENST00000602190	SEC61G	P60059	68 aa		5.84	□□□□□ -1.47
IRF3-231	ENST00000602190	COA5	Q86WW8	74 aa		5.84	□□□□□ -1.47
IRF3-231	ENST00000602190		A0A1B0GV90	55 aa		5.82	□□□□□ -1.48
IRF3-231	ENST00000602190	LOC100996750	A0A140TA64	210 aa		5.78	□□□□□ -1.48
IRF3-231	ENST00000602190	KRTAP5-2	Q701N4	177 aa		5.77	□□□□□ -1.49
IRF3-231	ENST00000602190	SMIM26	A0A096LP01	95 aa		5.71	□□□□□ -1.5
IRF3-231	ENST00000602190	KRTAP5-8	O75690	187 aa		5.7	□□□□□ -1.5
IRF3-231	ENST00000602190	MUC5AC	P98088	5654 aa		5.7	□□□□□ -1.5
IRF3-231	ENST00000602190		A8MU10	97 aa		5.69	□□□□□ -1.5
IRF3-231	ENST00000602190	AHNAK	Q09666	5890 aa	Known RBP	5.65	□□□□□ -1.5
IRF3-231	ENST00000602190	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.65	□□□□□ -1.51
IRF3-231	ENST00000602190	KRTAP19-4	Q3LI73	84 aa		5.6	□□□□□ -1.51
IRF3-231	ENST00000602190	SERP2	Q8N6R1	65 aa		5.6	□□□□□ -1.51
IRF3-231	ENST00000602190		A0A1B0GU69	56 aa		5.5	□□□□□ -1.53
IRF3-231	ENST00000602190	MT1A	P04731	61 aa		5.5	□□□□□ -1.53
IRF3-231	ENST00000602190	KRTAP6-1	Q3LI64	71 aa		5.49	□□□□□ -1.53
IRF3-231	ENST00000602190		K7ERU9	68 aa		5.48	□□□□□ -1.53
IRF3-231	ENST00000602190	KRTAP9-9	Q9BYP9	154 aa		5.41	□□□□□ -1.54
IRF3-231	ENST00000602190	OBSCN	Q5VST9	7968 aa		5.4	□□□□□ -1.55
IRF3-231	ENST00000602190		H7BZZ5	65 aa		5.37	□□□□□ -1.55
IRF3-231	ENST00000602190	KRTAP9-4	Q9BYQ2	154 aa		5.36	□□□□□ -1.55
IRF3-231	ENST00000602190	LCE3C	Q5T5A8	94 aa		5.35	□□□□□ -1.55
IRF3-231	ENST00000602190	KRTAP25-1	Q3LHN0	102 aa		5.32	□□□□□ -1.56
IRF3-231	ENST00000602190	KRTAP6-2	Q3LI66	62 aa		5.32	□□□□□ -1.56
IRF3-231	ENST00000602190	KRTAP15-1	Q3LI76	137 aa		5.29	□□□□□ -1.56
IRF3-231	ENST00000602190	COX7C	P15954	63 aa		5.26	□□□□□ -1.57
IRF3-231	ENST00000602190	KRTAP5-1	Q6L8H4	278 aa		5.26	□□□□□ -1.57
IRF3-231	ENST00000602190	KRTAP23-1	A1A580	65 aa		5.17	□□□□□ -1.58
IRF3-231	ENST00000602190	KRTAP9-6	A8MVA2	160 aa		5.15	□□□□□ -1.59
IRF3-231	ENST00000602190	PRR15L	Q9BU68	103 aa		5.14	□□□□□ -1.59
IRF3-231	ENST00000602190	LINC01558	Q9Y6Z2	57 aa		5.07	□□□□□ -1.6
IRF3-231	ENST00000602190	UQCR11	O14957	56 aa		5.01	□□□□□ -1.61
IRF3-231	ENST00000602190	MT3	P25713	68 aa		5.01	□□□□□ -1.61
IRF3-231	ENST00000602190	ANAPC13	Q9BS18	74 aa		5	□□□□□ -1.61
IRF3-231	ENST00000602190	PCP4	P48539	62 aa		4.91	□□□□□ -1.62
IRF3-231	ENST00000602190	CCDC179	H3BU77	68 aa		4.9	□□□□□ -1.63
IRF3-231	ENST00000602190	MIR22HG	Q0VDD5	57 aa		4.82	□□□□□ -1.64
IRF3-231	ENST00000602190	LCE1E	Q5T753	118 aa		4.82	□□□□□ -1.64
IRF3-231	ENST00000602190	ATP5E	P56381	51 aa	Predicted RBP	4.81	□□□□□ -1.64
IRF3-231	ENST00000602190		K7ERS5	55 aa		4.76	□□□□□ -1.65
IRF3-231	ENST00000602190	TMEM258	P61165	79 aa		4.76	□□□□□ -1.65
IRF3-231	ENST00000602190	KRTAP4-2	Q9BYR5	136 aa		4.62	□□□□□ -1.67
IRF3-231	ENST00000602190	RPS28	P62857	69 aa	Known RBP	4.58	□□□□□ -1.68
IRF3-231	ENST00000602190		Q1T7F1	81 aa		4.5	□□□□□ -1.69
IRF3-231	ENST00000602190	CDC42SE1	Q9NRR8	79 aa		4.49	□□□□□ -1.69
IRF3-231	ENST00000602190	LCE1C	Q5T751	118 aa		4.47	□□□□□ -1.69
IRF3-231	ENST00000602190	LCE1B	Q5T7P3	118 aa		4.47	□□□□□ -1.69
IRF3-231	ENST00000602190	ROMO1	P60602	79 aa		4.41	□□□□□ -1.7
IRF3-231	ENST00000602190		V9GYY9	64 aa		4.39	□□□□□ -1.71
IRF3-231	ENST00000602190	PSPHP1	O15172	72 aa		4.37	□□□□□ -1.71
IRF3-231	ENST00000602190	KRTAP4-12	Q9BQ66	201 aa		4.25	□□□□□ -1.73
IRF3-231	ENST00000602190	KRTAP5-11	Q6L8G4	156 aa		4.21	□□□□□ -1.74
IRF3-231	ENST00000602190		A6NED7	52 aa		4.16	□□□□□ -1.74
IRF3-231	ENST00000602190	LCE1F	Q5T754	118 aa		4.12	□□□□□ -1.75
IRF3-231	ENST00000602190	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.05	□□□□□ -1.76
IRF3-231	ENST00000602190	BRK1	Q8WUW1	75 aa		4.04	□□□□□ -1.76
IRF3-231	ENST00000602190	PRO0628	Q9UI54	55 aa		3.94	□□□□□ -1.78
IRF3-231	ENST00000602190	PHGR1	C9JFL3	82 aa		3.9	□□□□□ -1.79
IRF3-231	ENST00000602190	PMAIP1	Q13794	54 aa		3.8	□□□□□ -1.8
IRF3-231	ENST00000602190	LCE3D	Q9BYE3	92 aa		3.71	□□□□□ -1.82
IRF3-231	ENST00000602190	KRTAP21-2	Q3LI59	83 aa		3.67	□□□□□ -1.82
IRF3-231	ENST00000602190	KTN1-AS1	Q86SY8	53 aa		3.67	□□□□□ -1.82
IRF3-231	ENST00000602190	PRAC1	Q96KF2	57 aa		3.58	□□□□□ -1.84
IRF3-231	ENST00000602190	SVIP	Q8NHG7	77 aa		3.41	□□□□□ -1.86
IRF3-231	ENST00000602190	LCE3E	Q5T5B0	92 aa		3.4	□□□□□ -1.87
IRF3-231	ENST00000602190	MUC19	Q7Z5P9	8384 aa		3.34	□□□□□ -1.87
IRF3-231	ENST00000602190	KRTAP4-4	Q9BYR3	166 aa		3.32	□□□□□ -1.88
IRF3-231	ENST00000602190	KRTAP21-1	Q3LI58	79 aa		3	□□□□□ -1.93
IRF3-231	ENST00000602190	LUZP6	Q538Z0	58 aa		2.92	□□□□□ -1.94
IRF3-231	ENST00000602190	NDUFAF8	A1L188	74 aa		2.79	□□□□□ -1.96
IRF3-231	ENST00000602190		A0A0A0MQY5	61 aa		2.42	□□□□□ -2.02
IRF3-231	ENST00000602190	MUC16	Q8WXI7	14507 aa		2.4	□□□□□ -2.02
IRF3-231	ENST00000602190	INE1	O15225	51 aa		2.33	□□□□□ -2.04
IRF3-231	ENST00000602190		H3BS24	57 aa		2.26	□□□□□ -2.05
IRF3-231	ENST00000602190	PRM1	P04553	51 aa		2.21	□□□□□ -2.06

Retrieved 78 of 20,778 RNA–protein pairs in 563 ms