RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 MT1MQ8N339 61 aa9.97□□□□□ -0.81
ZNF558-206ENST00000599938 PSPHP1O15172 72 aa9.95□□□□□ -0.82
ZNF558-206ENST00000599938 Q1T7F1 81 aa9.9□□□□□ -0.82
ZNF558-206ENST00000599938 K7ERS5 55 aa9.88□□□□□ -0.83
ZNF558-206ENST00000599938 KRTAP12-3P60328 96 aa9.8□□□□□ -0.84
ZNF558-206ENST00000599938 KRTAP25-1Q3LHN0 102 aa9.77□□□□□ -0.85
ZNF558-206ENST00000599938 KRTAP4-9Q9BYQ8 210 aa9.75□□□□□ -0.85
ZNF558-206ENST00000599938 KRTAP4-3Q9BYR4 195 aa9.73□□□□□ -0.85
ZNF558-206ENST00000599938 A6NED7 52 aa9.63□□□□□ -0.87
ZNF558-206ENST00000599938 LCE4AQ5TA78 99 aa9.57□□□□□ -0.88
ZNF558-206ENST00000599938 LCE1DQ5T752 114 aa9.55□□□□□ -0.88
ZNF558-206ENST00000599938 KRTAP4-7Q9BYR0 210 aa9.54□□□□□ -0.88
ZNF558-206ENST00000599938 MT4P47944 62 aa9.48□□□□□ -0.89
ZNF558-206ENST00000599938 PCP4P48539 62 aa9.44□□□□□ -0.9
ZNF558-206ENST00000599938 RPS28P62857 69 aaKnown RBP9.44□□□□□ -0.9
ZNF558-206ENST00000599938 HMCN1Q96RW7 5635 aa9.43□□□□□ -0.9
ZNF558-206ENST00000599938 GPR98Q8WXG9 6306 aa9.42□□□□□ -0.9
ZNF558-206ENST00000599938 KRTAP5-4Q6L8H1 288 aa9.4□□□□□ -0.9
ZNF558-206ENST00000599938 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
ZNF558-206ENST00000599938 CDC42SE1Q9NRR8 79 aa9.36□□□□□ -0.91
ZNF558-206ENST00000599938 ROMO1P60602 79 aa9.2□□□□□ -0.94
ZNF558-206ENST00000599938 KRTAP19-4Q3LI73 84 aa9.2□□□□□ -0.94
ZNF558-206ENST00000599938 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
ZNF558-206ENST00000599938 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
ZNF558-206ENST00000599938 KRTAP5-5Q701N2 237 aaPredicted RBP9.11□□□□□ -0.95
ZNF558-206ENST00000599938 LOC100996750A0A140TA64 210 aa9.04□□□□□ -0.96
ZNF558-206ENST00000599938 AHNAK2Q8IVF2 5795 aa9.03□□□□□ -0.96
ZNF558-206ENST00000599938 LCE3CQ5T5A8 94 aa9.02□□□□□ -0.97
ZNF558-206ENST00000599938 KRTAP20-2Q3LI61 65 aa8.89□□□□□ -0.99
ZNF558-206ENST00000599938 KRTAP12-4P60329 112 aa8.86□□□□□ -0.99
ZNF558-206ENST00000599938 SPRR5A0A1B0GTR4 108 aa8.84□□□□□ -0.99
ZNF558-206ENST00000599938 KRTAP5-10Q6L8G5 202 aa8.78□□□□□ -1
ZNF558-206ENST00000599938 SYNE1Q8NF91 8797 aaKnown RBP8.78□□□□□ -1
ZNF558-206ENST00000599938 KRTAP5-3Q6L8H2 238 aa8.62□□□□□ -1.03
ZNF558-206ENST00000599938 MT1AP04731 61 aa8.55□□□□□ -1.04
ZNF558-206ENST00000599938 KRTAP9-6A8MVA2 160 aa8.51□□□□□ -1.05
ZNF558-206ENST00000599938 KRTAP6-1Q3LI64 71 aa8.48□□□□□ -1.05
ZNF558-206ENST00000599938 KRTAP5-7Q6L8G8 165 aa8.42□□□□□ -1.06
ZNF558-206ENST00000599938 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
ZNF558-206ENST00000599938 KRTAP5-2Q701N4 177 aa8.28□□□□□ -1.08
ZNF558-206ENST00000599938 KRTAP9-4Q9BYQ2 154 aa8.22□□□□□ -1.09
ZNF558-206ENST00000599938 KRTAP6-2Q3LI66 62 aa8.09□□□□□ -1.11
ZNF558-206ENST00000599938 KRTAP4-11Q9BYQ6 195 aa8.07□□□□□ -1.12
ZNF558-206ENST00000599938 PMAIP1Q13794 54 aa7.85□□□□□ -1.15
ZNF558-206ENST00000599938 MT3P25713 68 aa7.8□□□□□ -1.16
ZNF558-206ENST00000599938 KRTAP5-8O75690 187 aa7.79□□□□□ -1.16
ZNF558-206ENST00000599938 OBSCNQ5VST9 7968 aa7.74□□□□□ -1.17
ZNF558-206ENST00000599938 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
ZNF558-206ENST00000599938 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
ZNF558-206ENST00000599938 MUC5BQ9HC84 5762 aaPredicted RBP7.41□□□□□ -1.22
ZNF558-206ENST00000599938 KRTAP5-1Q6L8H4 278 aa7.38□□□□□ -1.23
ZNF558-206ENST00000599938 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
ZNF558-206ENST00000599938 AHNAKQ09666 5890 aaKnown RBP7.35□□□□□ -1.23
ZNF558-206ENST00000599938 MUC5ACP98088 5654 aa7.35□□□□□ -1.23
ZNF558-206ENST00000599938 LCE1EQ5T753 118 aa7.11□□□□□ -1.27
ZNF558-206ENST00000599938 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
ZNF558-206ENST00000599938 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
ZNF558-206ENST00000599938 LCE1BQ5T7P3 118 aa6.73□□□□□ -1.33
ZNF558-206ENST00000599938 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
ZNF558-206ENST00000599938 LCE1CQ5T751 118 aa6.61□□□□□ -1.35
ZNF558-206ENST00000599938 LCE3DQ9BYE3 92 aa6.53□□□□□ -1.36
ZNF558-206ENST00000599938 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
ZNF558-206ENST00000599938 LCE3EQ5T5B0 92 aa6.16□□□□□ -1.42
ZNF558-206ENST00000599938 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
ZNF558-206ENST00000599938 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.03□□□□□ -1.44
ZNF558-206ENST00000599938 KRTAP5-11Q6L8G4 156 aa5.99□□□□□ -1.45
ZNF558-206ENST00000599938 LCE1FQ5T754 118 aa5.77□□□□□ -1.49
ZNF558-206ENST00000599938 KRTAP21-2Q3LI59 83 aa5.57□□□□□ -1.52
ZNF558-206ENST00000599938 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
ZNF558-206ENST00000599938 PHGR1C9JFL3 82 aa5.16□□□□□ -1.58
ZNF558-206ENST00000599938 KRTAP4-4Q9BYR3 166 aa5.11□□□□□ -1.59
ZNF558-206ENST00000599938 MUC19Q7Z5P9 8384 aa4.77□□□□□ -1.65
ZNF558-206ENST00000599938 PRM1P04553 51 aa4.73□□□□□ -1.65
ZNF558-206ENST00000599938 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
ZNF558-206ENST00000599938 INE1O15225 51 aa4.38□□□□□ -1.71
ZNF558-206ENST00000599938 KRTAP21-1Q3LI58 79 aa3.88□□□□□ -1.79
ZNF558-206ENST00000599938 MUC16Q8WXI7 14507 aa3.37□□□□□ -1.87
ZNF558-206ENST00000599938 H3BS24 57 aa3.37□□□□□ -1.87
Retrieved 78 of 20,778 RNA–protein pairs in 47.8 ms