RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
IRF3-224ENST00000599680 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
IRF3-224ENST00000599680 K7ERS5 55 aa4.97□□□□□ -1.61
IRF3-224ENST00000599680 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
IRF3-224ENST00000599680 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
IRF3-224ENST00000599680 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
IRF3-224ENST00000599680 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
IRF3-224ENST00000599680 V9GYY9 64 aa4.93□□□□□ -1.62
IRF3-224ENST00000599680 MT4P47944 62 aa4.91□□□□□ -1.62
IRF3-224ENST00000599680 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
IRF3-224ENST00000599680 PSPHP1O15172 72 aa4.9□□□□□ -1.63
IRF3-224ENST00000599680 Q1T7F1 81 aa4.85□□□□□ -1.63
IRF3-224ENST00000599680 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
IRF3-224ENST00000599680 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
IRF3-224ENST00000599680 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
IRF3-224ENST00000599680 A6NED7 52 aa4.76□□□□□ -1.65
IRF3-224ENST00000599680 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
IRF3-224ENST00000599680 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
IRF3-224ENST00000599680 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
IRF3-224ENST00000599680 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
IRF3-224ENST00000599680 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
IRF3-224ENST00000599680 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
IRF3-224ENST00000599680 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
IRF3-224ENST00000599680 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
IRF3-224ENST00000599680 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
IRF3-224ENST00000599680 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
IRF3-224ENST00000599680 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
IRF3-224ENST00000599680 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
IRF3-224ENST00000599680 ROMO1P60602 79 aa4.57□□□□□ -1.68
IRF3-224ENST00000599680 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
IRF3-224ENST00000599680 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
IRF3-224ENST00000599680 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
IRF3-224ENST00000599680 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
IRF3-224ENST00000599680 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
IRF3-224ENST00000599680 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
IRF3-224ENST00000599680 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
IRF3-224ENST00000599680 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
IRF3-224ENST00000599680 MT1AP04731 61 aa4.34□□□□□ -1.71
IRF3-224ENST00000599680 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
IRF3-224ENST00000599680 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
IRF3-224ENST00000599680 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
IRF3-224ENST00000599680 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
IRF3-224ENST00000599680 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
IRF3-224ENST00000599680 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
IRF3-224ENST00000599680 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
IRF3-224ENST00000599680 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
IRF3-224ENST00000599680 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
IRF3-224ENST00000599680 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
IRF3-224ENST00000599680 MT3P25713 68 aa3.99□□□□□ -1.77
IRF3-224ENST00000599680 H3BS24 57 aa3.88□□□□□ -1.79
IRF3-224ENST00000599680 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
IRF3-224ENST00000599680 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
IRF3-224ENST00000599680 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
IRF3-224ENST00000599680 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
IRF3-224ENST00000599680 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
IRF3-224ENST00000599680 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
IRF3-224ENST00000599680 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
IRF3-224ENST00000599680 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
IRF3-224ENST00000599680 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
IRF3-224ENST00000599680 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
IRF3-224ENST00000599680 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
IRF3-224ENST00000599680 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
IRF3-224ENST00000599680 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
IRF3-224ENST00000599680 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
IRF3-224ENST00000599680 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
IRF3-224ENST00000599680 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
IRF3-224ENST00000599680 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
IRF3-224ENST00000599680 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
IRF3-224ENST00000599680 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
IRF3-224ENST00000599680 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
IRF3-224ENST00000599680 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
IRF3-224ENST00000599680 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
IRF3-224ENST00000599680 INE1O15225 51 aa2.68□□□□□ -1.98
IRF3-224ENST00000599680 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
IRF3-224ENST00000599680 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
IRF3-224ENST00000599680 PRM1P04553 51 aa2.33□□□□□ -2.04
IRF3-224ENST00000599680 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
IRF3-224ENST00000599680 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms