RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 H3BT86 120 aa2.1□□□□□ -2.07
LINC00343-207ENST00000599179 ATOX1O00244 68 aa2.09□□□□□ -2.07
LINC00343-207ENST00000599179 KRTAP13-4Q3LI77 160 aa2.09□□□□□ -2.07
LINC00343-207ENST00000599179 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
LINC00343-207ENST00000599179 UQCR10Q9UDW1 63 aa2.08□□□□□ -2.08
LINC00343-207ENST00000599179 UQCRQO14949 82 aa2.06□□□□□ -2.08
LINC00343-207ENST00000599179 DMAC1Q96GE9 116 aa2.04□□□□□ -2.08
LINC00343-207ENST00000599179 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
LINC00343-207ENST00000599179 PYY3Q5JQD4 70 aa2.03□□□□□ -2.08
LINC00343-207ENST00000599179 TAX1BP3O14907 124 aa2.01□□□□□ -2.09
LINC00343-207ENST00000599179 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
LINC00343-207ENST00000599179 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
LINC00343-207ENST00000599179 M0R143 59 aa1.99□□□□□ -2.09
LINC00343-207ENST00000599179 MT1AP04731 61 aa1.97□□□□□ -2.09
LINC00343-207ENST00000599179 TRAV7A0A075B6U4 112 aa1.96□□□□□ -2.1
LINC00343-207ENST00000599179 SPINT4Q6UDR6 99 aa1.96□□□□□ -2.1
LINC00343-207ENST00000599179 MP68P56378 58 aa1.94□□□□□ -2.1
LINC00343-207ENST00000599179 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
LINC00343-207ENST00000599179 TNP1P09430 55 aa1.91□□□□□ -2.1
LINC00343-207ENST00000599179 HIST1H4AP62805 103 aaKnown RBP1.91□□□□□ -2.1
LINC00343-207ENST00000599179 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
LINC00343-207ENST00000599179 ACYP2P14621 99 aa1.88□□□□□ -2.11
LINC00343-207ENST00000599179 CHKB-CPT1BH3BT56 60 aa1.87□□□□□ -2.11
LINC00343-207ENST00000599179 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
LINC00343-207ENST00000599179 H3BPC8 53 aa1.83□□□□□ -2.12
LINC00343-207ENST00000599179 ATP5EP2Q5VTU8 51 aa1.82□□□□□ -2.12
LINC00343-207ENST00000599179 PCP4L1A6NKN8 68 aa1.81□□□□□ -2.12
LINC00343-207ENST00000599179 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
LINC00343-207ENST00000599179 SEC61GP60059 68 aa1.77□□□□□ -2.13
LINC00343-207ENST00000599179 ETDBQ3ZM63 59 aa1.77□□□□□ -2.13
LINC00343-207ENST00000599179 SCGB1A1P11684 91 aa1.75□□□□□ -2.13
LINC00343-207ENST00000599179 A0A1B0GU33 70 aa1.73□□□□□ -2.13
LINC00343-207ENST00000599179 SERP1Q9Y6X1 66 aa1.71□□□□□ -2.14
LINC00343-207ENST00000599179 FAM240AA0A1B0GVK7 77 aa1.69□□□□□ -2.14
LINC00343-207ENST00000599179 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
LINC00343-207ENST00000599179 SMIM26A0A096LP01 95 aa1.68□□□□□ -2.14
LINC00343-207ENST00000599179 F8W1H4 67 aa1.68□□□□□ -2.14
LINC00343-207ENST00000599179 LINC00643Q86TS7 51 aa1.67□□□□□ -2.14
LINC00343-207ENST00000599179 GTF2H5Q6ZYL4 71 aa1.63□□□□□ -2.15
LINC00343-207ENST00000599179 SMIM6P0DI80 62 aa1.62□□□□□ -2.15
LINC00343-207ENST00000599179 COL5A1-AS1Q5SY13 56 aa1.61□□□□□ -2.15
LINC00343-207ENST00000599179 COA5Q86WW8 74 aa1.59□□□□□ -2.15
LINC00343-207ENST00000599179 SPANXA2-OT1Q8N9U9 137 aa1.58□□□□□ -2.16
LINC00343-207ENST00000599179 SERP2Q8N6R1 65 aa1.57□□□□□ -2.16
LINC00343-207ENST00000599179 SNURFQ9Y675 71 aa1.57□□□□□ -2.16
LINC00343-207ENST00000599179 A0A1B0GU69 56 aa1.5□□□□□ -2.17
LINC00343-207ENST00000599179 H7BZZ5 65 aa1.47□□□□□ -2.17
LINC00343-207ENST00000599179 SMIM20Q8N5G0 67 aa1.46□□□□□ -2.18
LINC00343-207ENST00000599179 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
LINC00343-207ENST00000599179 PSPHP1O15172 72 aa1.41□□□□□ -2.18
LINC00343-207ENST00000599179 LUZP6Q538Z0 58 aa1.41□□□□□ -2.18
LINC00343-207ENST00000599179 RPS28P62857 69 aaKnown RBP1.31□□□□□ -2.2
LINC00343-207ENST00000599179 PRO0628Q9UI54 55 aa1.31□□□□□ -2.2
LINC00343-207ENST00000599179 LOC105371267A0A1B0GV96 52 aa1.3□□□□□ -2.2
LINC00343-207ENST00000599179 J3QR89 54 aa1.28□□□□□ -2.2
LINC00343-207ENST00000599179 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
LINC00343-207ENST00000599179 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
LINC00343-207ENST00000599179 UQCR11O14957 56 aa1.26□□□□□ -2.21
LINC00343-207ENST00000599179 V9GYY9 64 aa1.26□□□□□ -2.21
LINC00343-207ENST00000599179 K7ERS5 55 aa1.24□□□□□ -2.21
LINC00343-207ENST00000599179 MIR22HGQ0VDD5 57 aa1.2□□□□□ -2.22
LINC00343-207ENST00000599179 ANAPC13Q9BS18 74 aa1.2□□□□□ -2.22
LINC00343-207ENST00000599179 LINC01558Q9Y6Z2 57 aa1.2□□□□□ -2.22
LINC00343-207ENST00000599179 A0A1B0GV90 55 aa1.17□□□□□ -2.22
LINC00343-207ENST00000599179 A6NED7 52 aa1.17□□□□□ -2.22
LINC00343-207ENST00000599179 CDC42SE1Q9NRR8 79 aa1.14□□□□□ -2.23
LINC00343-207ENST00000599179 COX7CP15954 63 aa1.12□□□□□ -2.23
LINC00343-207ENST00000599179 ROMO1P60602 79 aa1.09□□□□□ -2.23
LINC00343-207ENST00000599179 Q1T7F1 81 aa1.07□□□□□ -2.24
LINC00343-207ENST00000599179 K7ERU9 68 aa1.03□□□□□ -2.24
LINC00343-207ENST00000599179 ATP5EP56381 51 aaPredicted RBP0.95□□□□□ -2.26
LINC00343-207ENST00000599179 CCDC179H3BU77 68 aa0.87□□□□□ -2.27
LINC00343-207ENST00000599179 TMEM258P61165 79 aa0.86□□□□□ -2.27
LINC00343-207ENST00000599179 KTN1-AS1Q86SY8 53 aa0.82□□□□□ -2.28
LINC00343-207ENST00000599179 PMAIP1Q13794 54 aa0.69□□□□□ -2.3
LINC00343-207ENST00000599179 PRM1P04553 51 aa0.55□□□□□ -2.32
LINC00343-207ENST00000599179 INE1O15225 51 aa0.53□□□□□ -2.32
LINC00343-207ENST00000599179 BRK1Q8WUW1 75 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 62 ms