RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 AEBP2Q6ZN18 517 aaPredicted RBP34.45■■■■□ 3.11
LINC00343-207ENST00000599179 CHIC1Q5VXU3 224 aa32.88■■■□□ 2.85
LINC00343-207ENST00000599179 SENP3Q9H4L4 574 aaPredicted RBP29.56■■■□□ 2.32
LINC00343-207ENST00000599179 PHF23Q9BUL5 403 aaPredicted RBP29.09■■■□□ 2.25
LINC00343-207ENST00000599179 FOXD1Q16676 465 aa27.42■■□□□ 1.98
LINC00343-207ENST00000599179 PLPPR3Q6T4P5 718 aa26.36■■□□□ 1.81
LINC00343-207ENST00000599179 MSH5O43196 834 aa25.8■■□□□ 1.72
LINC00343-207ENST00000599179 PIAS4Q8N2W9 510 aaPredicted RBP25.7■■□□□ 1.7
LINC00343-207ENST00000599179 PPP6R1Q9UPN7 881 aa25.61■■□□□ 1.69
LINC00343-207ENST00000599179 ADRA2BP18089 450 aa25.55■■□□□ 1.68
LINC00343-207ENST00000599179 POTEDQ86YR6 584 aa24.96■■□□□ 1.59
LINC00343-207ENST00000599179 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
LINC00343-207ENST00000599179 MAPK8IP2Q13387 824 aaPredicted RBP23.42■■□□□ 1.34
LINC00343-207ENST00000599179 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
LINC00343-207ENST00000599179 PPP4R3CPQ6ZMV5 832 aa23.03■■□□□ 1.28
LINC00343-207ENST00000599179 CNKSR2Q8WXI2 1034 aa22.65■■□□□ 1.22
LINC00343-207ENST00000599179 HOXD11P31277 338 aaPredicted RBP22.57■■□□□ 1.2
LINC00343-207ENST00000599179 RNF216Q9NWF9 866 aaPredicted RBP22.44■■□□□ 1.18
LINC00343-207ENST00000599179 DCAF8L1A6NGE4 600 aa22.42■■□□□ 1.18
LINC00343-207ENST00000599179 NCBP3Q53F19 620 aaKnown RBP22.28■■□□□ 1.16
LINC00343-207ENST00000599179 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
LINC00343-207ENST00000599179 RNF39Q9H2S5 420 aa21.94■■□□□ 1.1
LINC00343-207ENST00000599179 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
LINC00343-207ENST00000599179 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
LINC00343-207ENST00000599179 C1QBPQ07021 282 aaKnown RBP21.69■■□□□ 1.06
LINC00343-207ENST00000599179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.03
LINC00343-207ENST00000599179 KCNA4P22459 653 aa21.41■■□□□ 1.02
LINC00343-207ENST00000599179 U3KPZ7 1027 aaPredicted RBP21.01■□□□□ 0.95
LINC00343-207ENST00000599179 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
LINC00343-207ENST00000599179 CAPN15O75808 1086 aa20.69■□□□□ 0.9
LINC00343-207ENST00000599179 APLP2Q06481 763 aa20.65■□□□□ 0.9
LINC00343-207ENST00000599179 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
LINC00343-207ENST00000599179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
LINC00343-207ENST00000599179 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
LINC00343-207ENST00000599179 DSG3P32926 999 aa20.54■□□□□ 0.88
LINC00343-207ENST00000599179 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
LINC00343-207ENST00000599179 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
LINC00343-207ENST00000599179 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
LINC00343-207ENST00000599179 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
LINC00343-207ENST00000599179 MYCNP04198 464 aaPredicted RBP20.28■□□□□ 0.84
LINC00343-207ENST00000599179 ABCB7O75027 752 aa20.15■□□□□ 0.82
LINC00343-207ENST00000599179 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
LINC00343-207ENST00000599179 POLA2Q14181 598 aa19.81■□□□□ 0.76
LINC00343-207ENST00000599179 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
LINC00343-207ENST00000599179 ZBTB22O15209 634 aa19.64■□□□□ 0.73
LINC00343-207ENST00000599179 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
LINC00343-207ENST00000599179 POTEHQ6S545 545 aa19.61■□□□□ 0.73
LINC00343-207ENST00000599179 ZBTB12Q9Y330 459 aaPredicted RBP19.58■□□□□ 0.72
LINC00343-207ENST00000599179 ATXN8OSP0DMR3 200 aa19.51■□□□□ 0.71
LINC00343-207ENST00000599179 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
LINC00343-207ENST00000599179 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
LINC00343-207ENST00000599179 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
LINC00343-207ENST00000599179 FBLN2P98095 1184 aa19.07■□□□□ 0.64
LINC00343-207ENST00000599179 REM2Q8IYK8 340 aaPredicted RBP18.98■□□□□ 0.63
LINC00343-207ENST00000599179 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
LINC00343-207ENST00000599179 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
LINC00343-207ENST00000599179 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
LINC00343-207ENST00000599179 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
LINC00343-207ENST00000599179 PITPNM1O00562 1244 aa18.77■□□□□ 0.6
LINC00343-207ENST00000599179 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
LINC00343-207ENST00000599179 PIP4P2Q8N4L2 257 aa18.7■□□□□ 0.58
LINC00343-207ENST00000599179 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
LINC00343-207ENST00000599179 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00343-207ENST00000599179 SSUH2Q9Y2M2 353 aa18.61■□□□□ 0.57
LINC00343-207ENST00000599179 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
LINC00343-207ENST00000599179 SPDYE1Q8NFV5 336 aaPredicted RBP18.57■□□□□ 0.56
LINC00343-207ENST00000599179 CLEC11AQ9Y240 323 aa18.46■□□□□ 0.55
LINC00343-207ENST00000599179 SP7Q8TDD2 431 aaPredicted RBP18.43■□□□□ 0.54
LINC00343-207ENST00000599179 HAX1O00165 279 aa18.37■□□□□ 0.53
LINC00343-207ENST00000599179 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC00343-207ENST00000599179 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
LINC00343-207ENST00000599179 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
LINC00343-207ENST00000599179 CHADLQ6NUI6 762 aa18.04■□□□□ 0.48
LINC00343-207ENST00000599179 C19orf67A6NJJ6 358 aa18.02■□□□□ 0.48
LINC00343-207ENST00000599179 EVX2Q03828 476 aa18.02■□□□□ 0.48
LINC00343-207ENST00000599179 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
LINC00343-207ENST00000599179 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
LINC00343-207ENST00000599179 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
LINC00343-207ENST00000599179 CD44P16070 742 aaKnown RBP17.75■□□□□ 0.43
LINC00343-207ENST00000599179 GABBR2O75899 941 aa17.72■□□□□ 0.43
LINC00343-207ENST00000599179 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
LINC00343-207ENST00000599179 CLCN6P51797 869 aa17.66■□□□□ 0.42
LINC00343-207ENST00000599179 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
LINC00343-207ENST00000599179 PROM2Q8N271 834 aa17.56■□□□□ 0.4
LINC00343-207ENST00000599179 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00343-207ENST00000599179 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
LINC00343-207ENST00000599179 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
LINC00343-207ENST00000599179 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
LINC00343-207ENST00000599179 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
LINC00343-207ENST00000599179 DCBLD2Q96PD2 775 aa17.32■□□□□ 0.36
LINC00343-207ENST00000599179 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
LINC00343-207ENST00000599179 POTEIP0CG38 1075 aa17.28■□□□□ 0.36
LINC00343-207ENST00000599179 LHX8Q68G74 356 aa17.27■□□□□ 0.36
LINC00343-207ENST00000599179 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
LINC00343-207ENST00000599179 PHF12Q96QT6 1004 aa17.2■□□□□ 0.34
LINC00343-207ENST00000599179 MIER1Q8N108 512 aa17.16■□□□□ 0.34
LINC00343-207ENST00000599179 FKBP8Q14318 412 aa17.11■□□□□ 0.33
LINC00343-207ENST00000599179 TSPYL2Q9H2G4 693 aaPredicted RBP17.07■□□□□ 0.32
LINC00343-207ENST00000599179 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
LINC00343-207ENST00000599179 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms