RNA–Protein interactions for RNA: ENST00000598913.5

SAMD4B-208, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SAMD4B, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-208ENST00000598913 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
SAMD4B-208ENST00000598913 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
SAMD4B-208ENST00000598913 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
SAMD4B-208ENST00000598913 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
SAMD4B-208ENST00000598913 MT1GP13640 62 aa7.56□□□□□ -1.2
SAMD4B-208ENST00000598913 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
SAMD4B-208ENST00000598913 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
SAMD4B-208ENST00000598913 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
SAMD4B-208ENST00000598913 SYNE1Q8NF91 8797 aaKnown RBP7.42□□□□□ -1.22
SAMD4B-208ENST00000598913 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
SAMD4B-208ENST00000598913 MT1MQ8N339 61 aa7.32□□□□□ -1.24
SAMD4B-208ENST00000598913 KRTAP19-3Q7Z4W3 81 aa7.26□□□□□ -1.25
SAMD4B-208ENST00000598913 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
SAMD4B-208ENST00000598913 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
SAMD4B-208ENST00000598913 OBSCNQ5VST9 7968 aa7.12□□□□□ -1.27
SAMD4B-208ENST00000598913 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
SAMD4B-208ENST00000598913 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
SAMD4B-208ENST00000598913 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
SAMD4B-208ENST00000598913 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
SAMD4B-208ENST00000598913 KRTAP12-4P60329 112 aa6.94□□□□□ -1.3
SAMD4B-208ENST00000598913 KRTAP6-1Q3LI64 71 aa6.78□□□□□ -1.32
SAMD4B-208ENST00000598913 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
SAMD4B-208ENST00000598913 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
SAMD4B-208ENST00000598913 SPRR2EP22531 72 aa6.49□□□□□ -1.37
SAMD4B-208ENST00000598913 SPRR2BP35325 72 aa6.49□□□□□ -1.37
SAMD4B-208ENST00000598913 SPRR2AP35326 72 aa6.49□□□□□ -1.37
SAMD4B-208ENST00000598913 MT1AP04731 61 aa6.44□□□□□ -1.38
SAMD4B-208ENST00000598913 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
SAMD4B-208ENST00000598913 LCE3DQ9BYE3 92 aa6.39□□□□□ -1.39
SAMD4B-208ENST00000598913 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
SAMD4B-208ENST00000598913 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
SAMD4B-208ENST00000598913 LCE3EQ5T5B0 92 aa6.26□□□□□ -1.41
SAMD4B-208ENST00000598913 PRM1P04553 51 aa6.18□□□□□ -1.42
SAMD4B-208ENST00000598913 SPRR2DP22532 72 aa6.16□□□□□ -1.42
SAMD4B-208ENST00000598913 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
SAMD4B-208ENST00000598913 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
SAMD4B-208ENST00000598913 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
SAMD4B-208ENST00000598913 MT3P25713 68 aa5.79□□□□□ -1.48
SAMD4B-208ENST00000598913 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
SAMD4B-208ENST00000598913 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
SAMD4B-208ENST00000598913 MT4P47944 62 aa5.69□□□□□ -1.5
SAMD4B-208ENST00000598913 NEBP20929 6669 aa5.63□□□□□ -1.51
SAMD4B-208ENST00000598913 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
SAMD4B-208ENST00000598913 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
SAMD4B-208ENST00000598913 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.54
SAMD4B-208ENST00000598913 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
SAMD4B-208ENST00000598913 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
SAMD4B-208ENST00000598913 MUC5ACP98088 5654 aa5.21□□□□□ -1.57
SAMD4B-208ENST00000598913 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
SAMD4B-208ENST00000598913 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
SAMD4B-208ENST00000598913 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
SAMD4B-208ENST00000598913 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
SAMD4B-208ENST00000598913 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
SAMD4B-208ENST00000598913 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
SAMD4B-208ENST00000598913 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
SAMD4B-208ENST00000598913 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
SAMD4B-208ENST00000598913 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
SAMD4B-208ENST00000598913 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
SAMD4B-208ENST00000598913 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
SAMD4B-208ENST00000598913 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
SAMD4B-208ENST00000598913 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
SAMD4B-208ENST00000598913 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.72
SAMD4B-208ENST00000598913 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
SAMD4B-208ENST00000598913 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
SAMD4B-208ENST00000598913 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.73
SAMD4B-208ENST00000598913 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
SAMD4B-208ENST00000598913 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
SAMD4B-208ENST00000598913 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
SAMD4B-208ENST00000598913 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
SAMD4B-208ENST00000598913 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
SAMD4B-208ENST00000598913 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
SAMD4B-208ENST00000598913 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
SAMD4B-208ENST00000598913 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SAMD4B-208ENST00000598913 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SAMD4B-208ENST00000598913 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SAMD4B-208ENST00000598913 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
SAMD4B-208ENST00000598913 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms