RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
ZNF558-205ENST00000597304 MT1GP13640 62 aa4.01□□□□□ -1.77
ZNF558-205ENST00000597304 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
ZNF558-205ENST00000597304 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
ZNF558-205ENST00000597304 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
ZNF558-205ENST00000597304 MT1MQ8N339 61 aa3.93□□□□□ -1.78
ZNF558-205ENST00000597304 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
ZNF558-205ENST00000597304 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
ZNF558-205ENST00000597304 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
ZNF558-205ENST00000597304 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
ZNF558-205ENST00000597304 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
ZNF558-205ENST00000597304 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
ZNF558-205ENST00000597304 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
ZNF558-205ENST00000597304 MT1AP04731 61 aa3.71□□□□□ -1.82
ZNF558-205ENST00000597304 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
ZNF558-205ENST00000597304 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
ZNF558-205ENST00000597304 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
ZNF558-205ENST00000597304 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
ZNF558-205ENST00000597304 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
ZNF558-205ENST00000597304 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
ZNF558-205ENST00000597304 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
ZNF558-205ENST00000597304 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
ZNF558-205ENST00000597304 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
ZNF558-205ENST00000597304 PRM1P04553 51 aa3.57□□□□□ -1.84
ZNF558-205ENST00000597304 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
ZNF558-205ENST00000597304 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
ZNF558-205ENST00000597304 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
ZNF558-205ENST00000597304 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
ZNF558-205ENST00000597304 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
ZNF558-205ENST00000597304 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.88
ZNF558-205ENST00000597304 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
ZNF558-205ENST00000597304 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
ZNF558-205ENST00000597304 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
ZNF558-205ENST00000597304 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
ZNF558-205ENST00000597304 SPRR2EP22531 72 aa3.24□□□□□ -1.89
ZNF558-205ENST00000597304 SPRR2BP35325 72 aa3.24□□□□□ -1.89
ZNF558-205ENST00000597304 SPRR2AP35326 72 aa3.24□□□□□ -1.89
ZNF558-205ENST00000597304 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
ZNF558-205ENST00000597304 MT3P25713 68 aa3.2□□□□□ -1.9
ZNF558-205ENST00000597304 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
ZNF558-205ENST00000597304 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.9
ZNF558-205ENST00000597304 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
ZNF558-205ENST00000597304 SPRR2DP22532 72 aa3.09□□□□□ -1.91
ZNF558-205ENST00000597304 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
ZNF558-205ENST00000597304 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
ZNF558-205ENST00000597304 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
ZNF558-205ENST00000597304 NEBP20929 6669 aa2.91□□□□□ -1.94
ZNF558-205ENST00000597304 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
ZNF558-205ENST00000597304 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
ZNF558-205ENST00000597304 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
ZNF558-205ENST00000597304 MT4P47944 62 aa2.73□□□□□ -1.97
ZNF558-205ENST00000597304 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
ZNF558-205ENST00000597304 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
ZNF558-205ENST00000597304 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
ZNF558-205ENST00000597304 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
ZNF558-205ENST00000597304 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
ZNF558-205ENST00000597304 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
ZNF558-205ENST00000597304 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
ZNF558-205ENST00000597304 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
ZNF558-205ENST00000597304 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
ZNF558-205ENST00000597304 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
ZNF558-205ENST00000597304 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
ZNF558-205ENST00000597304 LCE1CQ5T751 118 aa2.4□□□□□ -2.02
ZNF558-205ENST00000597304 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
ZNF558-205ENST00000597304 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
ZNF558-205ENST00000597304 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
ZNF558-205ENST00000597304 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
ZNF558-205ENST00000597304 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
ZNF558-205ENST00000597304 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
ZNF558-205ENST00000597304 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
ZNF558-205ENST00000597304 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ZNF558-205ENST00000597304 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
ZNF558-205ENST00000597304 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
ZNF558-205ENST00000597304 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
ZNF558-205ENST00000597304 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
ZNF558-205ENST00000597304 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
ZNF558-205ENST00000597304 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
ZNF558-205ENST00000597304 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 103.6 ms