RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 K7ERS5 55 aa7.2□□□□□ -1.26
COPE-204ENST00000593827 MT1LQ93083 61 aa7.14□□□□□ -1.27
COPE-204ENST00000593827 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
COPE-204ENST00000593827 Q1T7F1 81 aa7.11□□□□□ -1.27
COPE-204ENST00000593827 MT1MQ8N339 61 aa7.09□□□□□ -1.27
COPE-204ENST00000593827 PSPHP1O15172 72 aa7.07□□□□□ -1.28
COPE-204ENST00000593827 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
COPE-204ENST00000593827 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
COPE-204ENST00000593827 A6NED7 52 aa6.91□□□□□ -1.3
COPE-204ENST00000593827 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
COPE-204ENST00000593827 LCE4AQ5TA78 99 aa6.89□□□□□ -1.31
COPE-204ENST00000593827 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
COPE-204ENST00000593827 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
COPE-204ENST00000593827 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
COPE-204ENST00000593827 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
COPE-204ENST00000593827 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
COPE-204ENST00000593827 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
COPE-204ENST00000593827 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
COPE-204ENST00000593827 MT4P47944 62 aa6.73□□□□□ -1.33
COPE-204ENST00000593827 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
COPE-204ENST00000593827 PCP4P48539 62 aa6.71□□□□□ -1.34
COPE-204ENST00000593827 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
COPE-204ENST00000593827 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
COPE-204ENST00000593827 ROMO1P60602 79 aa6.61□□□□□ -1.35
COPE-204ENST00000593827 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
COPE-204ENST00000593827 KRTAP5-7Q6L8G8 165 aa6.57□□□□□ -1.36
COPE-204ENST00000593827 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
COPE-204ENST00000593827 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
COPE-204ENST00000593827 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
COPE-204ENST00000593827 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
COPE-204ENST00000593827 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
COPE-204ENST00000593827 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
COPE-204ENST00000593827 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
COPE-204ENST00000593827 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
COPE-204ENST00000593827 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
COPE-204ENST00000593827 MT1AP04731 61 aa6.1□□□□□ -1.43
COPE-204ENST00000593827 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
COPE-204ENST00000593827 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
COPE-204ENST00000593827 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
COPE-204ENST00000593827 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
COPE-204ENST00000593827 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
COPE-204ENST00000593827 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
COPE-204ENST00000593827 AHNAKQ09666 5890 aaKnown RBP5.8□□□□□ -1.48
COPE-204ENST00000593827 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
COPE-204ENST00000593827 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
COPE-204ENST00000593827 MUC5ACP98088 5654 aa5.71□□□□□ -1.49
COPE-204ENST00000593827 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
COPE-204ENST00000593827 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
COPE-204ENST00000593827 MT3P25713 68 aa5.63□□□□□ -1.51
COPE-204ENST00000593827 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
COPE-204ENST00000593827 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
COPE-204ENST00000593827 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
COPE-204ENST00000593827 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
COPE-204ENST00000593827 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
COPE-204ENST00000593827 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
COPE-204ENST00000593827 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
COPE-204ENST00000593827 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
COPE-204ENST00000593827 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
COPE-204ENST00000593827 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
COPE-204ENST00000593827 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
COPE-204ENST00000593827 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
COPE-204ENST00000593827 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
COPE-204ENST00000593827 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
COPE-204ENST00000593827 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
COPE-204ENST00000593827 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
COPE-204ENST00000593827 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
COPE-204ENST00000593827 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
COPE-204ENST00000593827 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
COPE-204ENST00000593827 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
COPE-204ENST00000593827 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
COPE-204ENST00000593827 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
COPE-204ENST00000593827 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
COPE-204ENST00000593827 PRM1P04553 51 aa3.34□□□□□ -1.87
COPE-204ENST00000593827 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
COPE-204ENST00000593827 INE1O15225 51 aa3.04□□□□□ -1.92
COPE-204ENST00000593827 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
COPE-204ENST00000593827 H3BS24 57 aa2.82□□□□□ -1.96
COPE-204ENST00000593827 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms