RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
CNN1-210ENST00000592923 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
CNN1-210ENST00000592923 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
CNN1-210ENST00000592923 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
CNN1-210ENST00000592923 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
CNN1-210ENST00000592923 MT1GP13640 62 aa5.27□□□□□ -1.57
CNN1-210ENST00000592923 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
CNN1-210ENST00000592923 MT1MQ8N339 61 aa5.25□□□□□ -1.57
CNN1-210ENST00000592923 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
CNN1-210ENST00000592923 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
CNN1-210ENST00000592923 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
CNN1-210ENST00000592923 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
CNN1-210ENST00000592923 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
CNN1-210ENST00000592923 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
CNN1-210ENST00000592923 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
CNN1-210ENST00000592923 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
CNN1-210ENST00000592923 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
CNN1-210ENST00000592923 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
CNN1-210ENST00000592923 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
CNN1-210ENST00000592923 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
CNN1-210ENST00000592923 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
CNN1-210ENST00000592923 NEBP20929 6669 aa4.92□□□□□ -1.62
CNN1-210ENST00000592923 SPRR2EP22531 72 aa4.88□□□□□ -1.63
CNN1-210ENST00000592923 SPRR2BP35325 72 aa4.88□□□□□ -1.63
CNN1-210ENST00000592923 SPRR2AP35326 72 aa4.88□□□□□ -1.63
CNN1-210ENST00000592923 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
CNN1-210ENST00000592923 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
CNN1-210ENST00000592923 MT1AP04731 61 aa4.7□□□□□ -1.66
CNN1-210ENST00000592923 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CNN1-210ENST00000592923 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
CNN1-210ENST00000592923 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
CNN1-210ENST00000592923 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
CNN1-210ENST00000592923 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
CNN1-210ENST00000592923 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CNN1-210ENST00000592923 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CNN1-210ENST00000592923 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
CNN1-210ENST00000592923 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
CNN1-210ENST00000592923 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
CNN1-210ENST00000592923 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
CNN1-210ENST00000592923 MT3P25713 68 aa4.23□□□□□ -1.73
CNN1-210ENST00000592923 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
CNN1-210ENST00000592923 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
CNN1-210ENST00000592923 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
CNN1-210ENST00000592923 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
CNN1-210ENST00000592923 MT4P47944 62 aa4.06□□□□□ -1.76
CNN1-210ENST00000592923 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
CNN1-210ENST00000592923 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
CNN1-210ENST00000592923 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CNN1-210ENST00000592923 PRM1P04553 51 aa3.98□□□□□ -1.77
CNN1-210ENST00000592923 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
CNN1-210ENST00000592923 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
CNN1-210ENST00000592923 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
CNN1-210ENST00000592923 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CNN1-210ENST00000592923 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
CNN1-210ENST00000592923 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
CNN1-210ENST00000592923 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CNN1-210ENST00000592923 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
CNN1-210ENST00000592923 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CNN1-210ENST00000592923 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.86
CNN1-210ENST00000592923 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
CNN1-210ENST00000592923 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
CNN1-210ENST00000592923 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
CNN1-210ENST00000592923 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CNN1-210ENST00000592923 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
CNN1-210ENST00000592923 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CNN1-210ENST00000592923 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
CNN1-210ENST00000592923 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
CNN1-210ENST00000592923 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CNN1-210ENST00000592923 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.93
CNN1-210ENST00000592923 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CNN1-210ENST00000592923 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
CNN1-210ENST00000592923 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CNN1-210ENST00000592923 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CNN1-210ENST00000592923 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
CNN1-210ENST00000592923 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
CNN1-210ENST00000592923 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CNN1-210ENST00000592923 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 388.6 ms