RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
SPC24-206ENST00000592540 MT1GP13640 62 aa5.74□□□□□ -1.49
SPC24-206ENST00000592540 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
SPC24-206ENST00000592540 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
SPC24-206ENST00000592540 MT1MQ8N339 61 aa5.65□□□□□ -1.51
SPC24-206ENST00000592540 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
SPC24-206ENST00000592540 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
SPC24-206ENST00000592540 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
SPC24-206ENST00000592540 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
SPC24-206ENST00000592540 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
SPC24-206ENST00000592540 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
SPC24-206ENST00000592540 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
SPC24-206ENST00000592540 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
SPC24-206ENST00000592540 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.56
SPC24-206ENST00000592540 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
SPC24-206ENST00000592540 MT1AP04731 61 aa5.29□□□□□ -1.56
SPC24-206ENST00000592540 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
SPC24-206ENST00000592540 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
SPC24-206ENST00000592540 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
SPC24-206ENST00000592540 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
SPC24-206ENST00000592540 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
SPC24-206ENST00000592540 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
SPC24-206ENST00000592540 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
SPC24-206ENST00000592540 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
SPC24-206ENST00000592540 PRM1P04553 51 aa5.05□□□□□ -1.6
SPC24-206ENST00000592540 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
SPC24-206ENST00000592540 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
SPC24-206ENST00000592540 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
SPC24-206ENST00000592540 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.64
SPC24-206ENST00000592540 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
SPC24-206ENST00000592540 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SPC24-206ENST00000592540 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SPC24-206ENST00000592540 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
SPC24-206ENST00000592540 SPRR2EP22531 72 aa4.66□□□□□ -1.66
SPC24-206ENST00000592540 SPRR2BP35325 72 aa4.66□□□□□ -1.66
SPC24-206ENST00000592540 SPRR2AP35326 72 aa4.66□□□□□ -1.66
SPC24-206ENST00000592540 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
SPC24-206ENST00000592540 MT3P25713 68 aa4.57□□□□□ -1.68
SPC24-206ENST00000592540 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
SPC24-206ENST00000592540 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
SPC24-206ENST00000592540 SPRR2DP22532 72 aa4.44□□□□□ -1.7
SPC24-206ENST00000592540 NEBP20929 6669 aa4.3□□□□□ -1.72
SPC24-206ENST00000592540 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
SPC24-206ENST00000592540 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
SPC24-206ENST00000592540 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
SPC24-206ENST00000592540 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
SPC24-206ENST00000592540 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
SPC24-206ENST00000592540 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
SPC24-206ENST00000592540 MT4P47944 62 aa3.94□□□□□ -1.78
SPC24-206ENST00000592540 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
SPC24-206ENST00000592540 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SPC24-206ENST00000592540 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
SPC24-206ENST00000592540 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SPC24-206ENST00000592540 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
SPC24-206ENST00000592540 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
SPC24-206ENST00000592540 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
SPC24-206ENST00000592540 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
SPC24-206ENST00000592540 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
SPC24-206ENST00000592540 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
SPC24-206ENST00000592540 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
SPC24-206ENST00000592540 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SPC24-206ENST00000592540 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
SPC24-206ENST00000592540 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SPC24-206ENST00000592540 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
SPC24-206ENST00000592540 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SPC24-206ENST00000592540 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
SPC24-206ENST00000592540 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
SPC24-206ENST00000592540 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
SPC24-206ENST00000592540 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
SPC24-206ENST00000592540 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
SPC24-206ENST00000592540 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SPC24-206ENST00000592540 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
SPC24-206ENST00000592540 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
SPC24-206ENST00000592540 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
SPC24-206ENST00000592540 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SPC24-206ENST00000592540 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SPC24-206ENST00000592540 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms