RNA–Protein interactions for RNA: ENST00000591978.1

CACTIN-209, Transcript of cactin, spliceosome C complex subunit, humanhuman

Gene CACTIN, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-209ENST00000591978 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
CACTIN-209ENST00000591978 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.31
CACTIN-209ENST00000591978 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
CACTIN-209ENST00000591978 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
CACTIN-209ENST00000591978 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
CACTIN-209ENST00000591978 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
CACTIN-209ENST00000591978 MT1MQ8N339 61 aa6.8□□□□□ -1.32
CACTIN-209ENST00000591978 MT1GP13640 62 aa6.79□□□□□ -1.32
CACTIN-209ENST00000591978 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
CACTIN-209ENST00000591978 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.33
CACTIN-209ENST00000591978 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
CACTIN-209ENST00000591978 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.35
CACTIN-209ENST00000591978 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
CACTIN-209ENST00000591978 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
CACTIN-209ENST00000591978 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
CACTIN-209ENST00000591978 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
CACTIN-209ENST00000591978 KRTAP5-9P26371 169 aa6.36□□□□□ -1.39
CACTIN-209ENST00000591978 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
CACTIN-209ENST00000591978 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
CACTIN-209ENST00000591978 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
CACTIN-209ENST00000591978 SPRR2EP22531 72 aa6.18□□□□□ -1.42
CACTIN-209ENST00000591978 SPRR2BP35325 72 aa6.18□□□□□ -1.42
CACTIN-209ENST00000591978 SPRR2AP35326 72 aa6.18□□□□□ -1.42
CACTIN-209ENST00000591978 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
CACTIN-209ENST00000591978 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
CACTIN-209ENST00000591978 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
CACTIN-209ENST00000591978 MT1AP04731 61 aa6.08□□□□□ -1.44
CACTIN-209ENST00000591978 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CACTIN-209ENST00000591978 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
CACTIN-209ENST00000591978 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
CACTIN-209ENST00000591978 SPRR2DP22532 72 aa5.93□□□□□ -1.46
CACTIN-209ENST00000591978 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
CACTIN-209ENST00000591978 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
CACTIN-209ENST00000591978 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
CACTIN-209ENST00000591978 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
CACTIN-209ENST00000591978 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
CACTIN-209ENST00000591978 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
CACTIN-209ENST00000591978 NEBP20929 6669 aa5.57□□□□□ -1.52
CACTIN-209ENST00000591978 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
CACTIN-209ENST00000591978 MT3P25713 68 aa5.46□□□□□ -1.53
CACTIN-209ENST00000591978 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.53
CACTIN-209ENST00000591978 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
CACTIN-209ENST00000591978 PRM1P04553 51 aa5.22□□□□□ -1.57
CACTIN-209ENST00000591978 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
CACTIN-209ENST00000591978 MT4P47944 62 aa5.19□□□□□ -1.58
CACTIN-209ENST00000591978 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
CACTIN-209ENST00000591978 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
CACTIN-209ENST00000591978 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
CACTIN-209ENST00000591978 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
CACTIN-209ENST00000591978 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CACTIN-209ENST00000591978 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
CACTIN-209ENST00000591978 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
CACTIN-209ENST00000591978 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
CACTIN-209ENST00000591978 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
CACTIN-209ENST00000591978 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
CACTIN-209ENST00000591978 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
CACTIN-209ENST00000591978 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
CACTIN-209ENST00000591978 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
CACTIN-209ENST00000591978 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CACTIN-209ENST00000591978 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
CACTIN-209ENST00000591978 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
CACTIN-209ENST00000591978 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
CACTIN-209ENST00000591978 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CACTIN-209ENST00000591978 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
CACTIN-209ENST00000591978 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
CACTIN-209ENST00000591978 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
CACTIN-209ENST00000591978 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
CACTIN-209ENST00000591978 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
CACTIN-209ENST00000591978 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CACTIN-209ENST00000591978 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
CACTIN-209ENST00000591978 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
CACTIN-209ENST00000591978 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CACTIN-209ENST00000591978 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
CACTIN-209ENST00000591978 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
CACTIN-209ENST00000591978 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
CACTIN-209ENST00000591978 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
CACTIN-209ENST00000591978 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
CACTIN-209ENST00000591978 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 124.7 ms