RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 INE1O15225 51 aa2.84□□□□□ -1.95
NPC1-213ENST00000591955 MUC2Q02817 5179 aa2.84□□□□□ -1.96
NPC1-213ENST00000591955 LPAP08519 4548 aa2.82□□□□□ -1.96
NPC1-213ENST00000591955 R4GN34 69 aa2.82□□□□□ -1.96
NPC1-213ENST00000591955 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
NPC1-213ENST00000591955 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
NPC1-213ENST00000591955 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
NPC1-213ENST00000591955 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
NPC1-213ENST00000591955 TNP1P09430 55 aa2.73□□□□□ -1.97
NPC1-213ENST00000591955 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
NPC1-213ENST00000591955 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
NPC1-213ENST00000591955 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
NPC1-213ENST00000591955 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
NPC1-213ENST00000591955 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
NPC1-213ENST00000591955 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
NPC1-213ENST00000591955 MT1HP80294 61 aa2.48□□□□□ -2.01
NPC1-213ENST00000591955 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
NPC1-213ENST00000591955 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
NPC1-213ENST00000591955 USH2AO75445 5202 aa2.44□□□□□ -2.02
NPC1-213ENST00000591955 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
NPC1-213ENST00000591955 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
NPC1-213ENST00000591955 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
NPC1-213ENST00000591955 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
NPC1-213ENST00000591955 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
NPC1-213ENST00000591955 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
NPC1-213ENST00000591955 M0R2T5 61 aa2.37□□□□□ -2.03
NPC1-213ENST00000591955 NEBP20929 6669 aa2.35□□□□□ -2.03
NPC1-213ENST00000591955 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
NPC1-213ENST00000591955 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
NPC1-213ENST00000591955 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
NPC1-213ENST00000591955 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
NPC1-213ENST00000591955 MT2AP02795 61 aa2.25□□□□□ -2.05
NPC1-213ENST00000591955 MT1FP04733 61 aa2.25□□□□□ -2.05
NPC1-213ENST00000591955 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
NPC1-213ENST00000591955 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
NPC1-213ENST00000591955 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
NPC1-213ENST00000591955 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
NPC1-213ENST00000591955 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
NPC1-213ENST00000591955 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
NPC1-213ENST00000591955 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
NPC1-213ENST00000591955 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
NPC1-213ENST00000591955 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
NPC1-213ENST00000591955 MT1XP80297 61 aa2.11□□□□□ -2.07
NPC1-213ENST00000591955 KMT2DO14686 5537 aa2.1□□□□□ -2.07
NPC1-213ENST00000591955 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
NPC1-213ENST00000591955 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
NPC1-213ENST00000591955 MT1BP07438 61 aa2.06□□□□□ -2.08
NPC1-213ENST00000591955 SPRR2EP22531 72 aa2.03□□□□□ -2.08
NPC1-213ENST00000591955 SPRR2BP35325 72 aa2.03□□□□□ -2.08
NPC1-213ENST00000591955 SPRR2AP35326 72 aa2.03□□□□□ -2.08
NPC1-213ENST00000591955 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
NPC1-213ENST00000591955 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
NPC1-213ENST00000591955 MT1EP04732 61 aa1.95□□□□□ -2.1
NPC1-213ENST00000591955 SPRR2DP22532 72 aa1.95□□□□□ -2.1
NPC1-213ENST00000591955 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
NPC1-213ENST00000591955 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
NPC1-213ENST00000591955 MT1LQ93083 61 aa1.92□□□□□ -2.1
NPC1-213ENST00000591955 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
NPC1-213ENST00000591955 MT1AP04731 61 aa1.87□□□□□ -2.11
NPC1-213ENST00000591955 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
NPC1-213ENST00000591955 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
NPC1-213ENST00000591955 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
NPC1-213ENST00000591955 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
NPC1-213ENST00000591955 MT1GP13640 62 aa1.77□□□□□ -2.13
NPC1-213ENST00000591955 MT4P47944 62 aa1.77□□□□□ -2.13
NPC1-213ENST00000591955 PRM1P04553 51 aa1.71□□□□□ -2.14
NPC1-213ENST00000591955 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
NPC1-213ENST00000591955 MT1MQ8N339 61 aa1.7□□□□□ -2.14
NPC1-213ENST00000591955 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
NPC1-213ENST00000591955 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
NPC1-213ENST00000591955 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
NPC1-213ENST00000591955 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
NPC1-213ENST00000591955 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
NPC1-213ENST00000591955 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
NPC1-213ENST00000591955 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
NPC1-213ENST00000591955 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
NPC1-213ENST00000591955 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
NPC1-213ENST00000591955 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 103 ms