RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 V9GYY9 64 aa9.52□□□□□ -0.89
SMAD4-213ENST00000591914 Q1T7F1 81 aa9.48□□□□□ -0.89
SMAD4-213ENST00000591914 PSPHP1O15172 72 aa9.47□□□□□ -0.89
SMAD4-213ENST00000591914 KRTAP12-3P60328 96 aa9.44□□□□□ -0.9
SMAD4-213ENST00000591914 KRTAP4-9Q9BYQ8 210 aa9.44□□□□□ -0.9
SMAD4-213ENST00000591914 GPR98Q8WXG9 6306 aa9.42□□□□□ -0.9
SMAD4-213ENST00000591914 KRTAP4-3Q9BYR4 195 aa9.41□□□□□ -0.9
SMAD4-213ENST00000591914 K7ERS5 55 aa9.39□□□□□ -0.91
SMAD4-213ENST00000591914 KRTAP25-1Q3LHN0 102 aa9.39□□□□□ -0.91
SMAD4-213ENST00000591914 LCE4AQ5TA78 99 aa9.29□□□□□ -0.92
SMAD4-213ENST00000591914 LCE1DQ5T752 114 aa9.26□□□□□ -0.93
SMAD4-213ENST00000591914 KRTAP4-7Q9BYR0 210 aa9.23□□□□□ -0.93
SMAD4-213ENST00000591914 KRTAP5-4Q6L8H1 288 aa9.17□□□□□ -0.94
SMAD4-213ENST00000591914 HMCN1Q96RW7 5635 aa9.15□□□□□ -0.94
SMAD4-213ENST00000591914 A6NED7 52 aa9.15□□□□□ -0.94
SMAD4-213ENST00000591914 MT4P47944 62 aa9.14□□□□□ -0.95
SMAD4-213ENST00000591914 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
SMAD4-213ENST00000591914 RPS28P62857 69 aaKnown RBP9.04□□□□□ -0.96
SMAD4-213ENST00000591914 KRTAP19-4Q3LI73 84 aa8.94□□□□□ -0.98
SMAD4-213ENST00000591914 PCP4P48539 62 aa8.93□□□□□ -0.98
SMAD4-213ENST00000591914 KRTAP4-6Q9BYQ5 205 aa8.92□□□□□ -0.98
SMAD4-213ENST00000591914 CDC42SE1Q9NRR8 79 aa8.92□□□□□ -0.98
SMAD4-213ENST00000591914 KRTAP5-5Q701N2 237 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-213ENST00000591914 KRTAP15-1Q3LI76 137 aa8.86□□□□□ -0.99
SMAD4-213ENST00000591914 AHNAK2Q8IVF2 5795 aa8.8□□□□□ -1
SMAD4-213ENST00000591914 ROMO1P60602 79 aa8.79□□□□□ -1
SMAD4-213ENST00000591914 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
SMAD4-213ENST00000591914 LCE3CQ5T5A8 94 aa8.71□□□□□ -1.02
SMAD4-213ENST00000591914 KRTAP20-2Q3LI61 65 aa8.62□□□□□ -1.03
SMAD4-213ENST00000591914 KRTAP5-10Q6L8G5 202 aa8.62□□□□□ -1.03
SMAD4-213ENST00000591914 SPRR5A0A1B0GTR4 108 aa8.61□□□□□ -1.03
SMAD4-213ENST00000591914 KRTAP12-4P60329 112 aa8.57□□□□□ -1.04
SMAD4-213ENST00000591914 SYNE1Q8NF91 8797 aaKnown RBP8.47□□□□□ -1.05
SMAD4-213ENST00000591914 KRTAP5-3Q6L8H2 238 aa8.39□□□□□ -1.07
SMAD4-213ENST00000591914 KRTAP5-7Q6L8G8 165 aa8.37□□□□□ -1.07
SMAD4-213ENST00000591914 MT1AP04731 61 aa8.26□□□□□ -1.09
SMAD4-213ENST00000591914 KRTAP9-6A8MVA2 160 aa8.24□□□□□ -1.09
SMAD4-213ENST00000591914 KRTAP6-1Q3LI64 71 aa8.2□□□□□ -1.1
SMAD4-213ENST00000591914 KRTAP5-2Q701N4 177 aa8.05□□□□□ -1.12
SMAD4-213ENST00000591914 KRTAP9-4Q9BYQ2 154 aa7.97□□□□□ -1.13
SMAD4-213ENST00000591914 BRK1Q8WUW1 75 aa7.9□□□□□ -1.14
SMAD4-213ENST00000591914 KRTAP4-11Q9BYQ6 195 aa7.85□□□□□ -1.15
SMAD4-213ENST00000591914 KRTAP6-2Q3LI66 62 aa7.82□□□□□ -1.16
SMAD4-213ENST00000591914 KRTAP5-8O75690 187 aa7.59□□□□□ -1.19
SMAD4-213ENST00000591914 OBSCNQ5VST9 7968 aa7.57□□□□□ -1.2
SMAD4-213ENST00000591914 MT3P25713 68 aa7.55□□□□□ -1.2
SMAD4-213ENST00000591914 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
SMAD4-213ENST00000591914 MUC5ACP98088 5654 aa7.26□□□□□ -1.25
SMAD4-213ENST00000591914 AHNAKQ09666 5890 aaKnown RBP7.24□□□□□ -1.25
SMAD4-213ENST00000591914 MUC5BQ9HC84 5762 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-213ENST00000591914 KRTAP5-1Q6L8H4 278 aa7.2□□□□□ -1.26
SMAD4-213ENST00000591914 H3BS24 57 aa7.16□□□□□ -1.26
SMAD4-213ENST00000591914 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
SMAD4-213ENST00000591914 KRTAP9-9Q9BYP9 154 aa7.15□□□□□ -1.26
SMAD4-213ENST00000591914 LCE1EQ5T753 118 aa6.93□□□□□ -1.3
SMAD4-213ENST00000591914 PRO0628Q9UI54 55 aa6.9□□□□□ -1.3
SMAD4-213ENST00000591914 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
SMAD4-213ENST00000591914 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
SMAD4-213ENST00000591914 LCE1BQ5T7P3 118 aa6.47□□□□□ -1.37
SMAD4-213ENST00000591914 LCE1CQ5T751 118 aa6.43□□□□□ -1.38
SMAD4-213ENST00000591914 KRTAP4-12Q9BQ66 201 aa6.39□□□□□ -1.39
SMAD4-213ENST00000591914 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
SMAD4-213ENST00000591914 LCE3DQ9BYE3 92 aa6.29□□□□□ -1.4
SMAD4-213ENST00000591914 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
SMAD4-213ENST00000591914 LCE3EQ5T5B0 92 aa5.93□□□□□ -1.46
SMAD4-213ENST00000591914 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-213ENST00000591914 KRTAP5-11Q6L8G4 156 aa5.82□□□□□ -1.48
SMAD4-213ENST00000591914 LCE1FQ5T754 118 aa5.63□□□□□ -1.51
SMAD4-213ENST00000591914 KRTAP21-2Q3LI59 83 aa5.42□□□□□ -1.54
SMAD4-213ENST00000591914 PHGR1C9JFL3 82 aa5.02□□□□□ -1.61
SMAD4-213ENST00000591914 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
SMAD4-213ENST00000591914 KRTAP4-4Q9BYR3 166 aa4.91□□□□□ -1.62
SMAD4-213ENST00000591914 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
SMAD4-213ENST00000591914 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
SMAD4-213ENST00000591914 PRM1P04553 51 aa4.49□□□□□ -1.69
SMAD4-213ENST00000591914 INE1O15225 51 aa3.87□□□□□ -1.79
SMAD4-213ENST00000591914 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
SMAD4-213ENST00000591914 MUC16Q8WXI7 14507 aa3.27□□□□□ -1.89
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms