RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
CNTNAP1-204ENST00000591662 SPRR2DP22532 72 aa3.6□□□□□ -1.83
CNTNAP1-204ENST00000591662 MT1LQ93083 61 aa3.6□□□□□ -1.83
CNTNAP1-204ENST00000591662 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
CNTNAP1-204ENST00000591662 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
CNTNAP1-204ENST00000591662 MT1EP04732 61 aa3.54□□□□□ -1.84
CNTNAP1-204ENST00000591662 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
CNTNAP1-204ENST00000591662 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
CNTNAP1-204ENST00000591662 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CNTNAP1-204ENST00000591662 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
CNTNAP1-204ENST00000591662 KMT2DO14686 5537 aa3.47□□□□□ -1.85
CNTNAP1-204ENST00000591662 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
CNTNAP1-204ENST00000591662 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
CNTNAP1-204ENST00000591662 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
CNTNAP1-204ENST00000591662 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
CNTNAP1-204ENST00000591662 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
CNTNAP1-204ENST00000591662 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
CNTNAP1-204ENST00000591662 MT1MQ8N339 61 aa3.36□□□□□ -1.87
CNTNAP1-204ENST00000591662 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
CNTNAP1-204ENST00000591662 PRM1P04553 51 aa3.32□□□□□ -1.88
CNTNAP1-204ENST00000591662 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
CNTNAP1-204ENST00000591662 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
CNTNAP1-204ENST00000591662 KRTAP9-6A0A140TA67 174 aa3.26□□□□□ -1.89
CNTNAP1-204ENST00000591662 MT3P25713 68 aa3.25□□□□□ -1.89
CNTNAP1-204ENST00000591662 MT1AP04731 61 aa3.23□□□□□ -1.89
CNTNAP1-204ENST00000591662 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
CNTNAP1-204ENST00000591662 MT4P47944 62 aa3.21□□□□□ -1.9
CNTNAP1-204ENST00000591662 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
CNTNAP1-204ENST00000591662 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CNTNAP1-204ENST00000591662 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
CNTNAP1-204ENST00000591662 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CNTNAP1-204ENST00000591662 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
CNTNAP1-204ENST00000591662 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CNTNAP1-204ENST00000591662 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
CNTNAP1-204ENST00000591662 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
CNTNAP1-204ENST00000591662 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
CNTNAP1-204ENST00000591662 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
CNTNAP1-204ENST00000591662 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
CNTNAP1-204ENST00000591662 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
CNTNAP1-204ENST00000591662 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
CNTNAP1-204ENST00000591662 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
CNTNAP1-204ENST00000591662 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
CNTNAP1-204ENST00000591662 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
CNTNAP1-204ENST00000591662 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
CNTNAP1-204ENST00000591662 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
CNTNAP1-204ENST00000591662 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
CNTNAP1-204ENST00000591662 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
CNTNAP1-204ENST00000591662 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
CNTNAP1-204ENST00000591662 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
CNTNAP1-204ENST00000591662 NEBP20929 6669 aa2.59□□□□□ -1.99
CNTNAP1-204ENST00000591662 LCE1CQ5T751 118 aa2.54□□□□□ -2
CNTNAP1-204ENST00000591662 LCE1EQ5T753 118 aa2.54□□□□□ -2
CNTNAP1-204ENST00000591662 LCE1FQ5T754 118 aa2.54□□□□□ -2
CNTNAP1-204ENST00000591662 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
CNTNAP1-204ENST00000591662 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
CNTNAP1-204ENST00000591662 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
CNTNAP1-204ENST00000591662 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
CNTNAP1-204ENST00000591662 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
CNTNAP1-204ENST00000591662 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
CNTNAP1-204ENST00000591662 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
CNTNAP1-204ENST00000591662 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
CNTNAP1-204ENST00000591662 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
CNTNAP1-204ENST00000591662 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CNTNAP1-204ENST00000591662 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CNTNAP1-204ENST00000591662 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
CNTNAP1-204ENST00000591662 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CNTNAP1-204ENST00000591662 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
CNTNAP1-204ENST00000591662 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
CNTNAP1-204ENST00000591662 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CNTNAP1-204ENST00000591662 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
CNTNAP1-204ENST00000591662 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CNTNAP1-204ENST00000591662 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CNTNAP1-204ENST00000591662 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
CNTNAP1-204ENST00000591662 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
CNTNAP1-204ENST00000591662 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
CNTNAP1-204ENST00000591662 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CNTNAP1-204ENST00000591662 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CNTNAP1-204ENST00000591662 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 1906.1 ms