RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
LSM12-204ENST00000591247 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
LSM12-204ENST00000591247 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
LSM12-204ENST00000591247 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
LSM12-204ENST00000591247 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
LSM12-204ENST00000591247 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
LSM12-204ENST00000591247 MT1MQ8N339 61 aa5.65□□□□□ -1.51
LSM12-204ENST00000591247 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
LSM12-204ENST00000591247 MT1GP13640 62 aa5.63□□□□□ -1.51
LSM12-204ENST00000591247 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
LSM12-204ENST00000591247 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
LSM12-204ENST00000591247 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
LSM12-204ENST00000591247 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
LSM12-204ENST00000591247 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
LSM12-204ENST00000591247 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
LSM12-204ENST00000591247 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
LSM12-204ENST00000591247 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
LSM12-204ENST00000591247 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
LSM12-204ENST00000591247 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
LSM12-204ENST00000591247 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
LSM12-204ENST00000591247 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
LSM12-204ENST00000591247 SPRR2EP22531 72 aa5.19□□□□□ -1.58
LSM12-204ENST00000591247 SPRR2BP35325 72 aa5.19□□□□□ -1.58
LSM12-204ENST00000591247 SPRR2AP35326 72 aa5.19□□□□□ -1.58
LSM12-204ENST00000591247 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
LSM12-204ENST00000591247 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
LSM12-204ENST00000591247 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
LSM12-204ENST00000591247 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
LSM12-204ENST00000591247 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
LSM12-204ENST00000591247 MT1AP04731 61 aa5.02□□□□□ -1.61
LSM12-204ENST00000591247 SPRR2DP22532 72 aa4.97□□□□□ -1.61
LSM12-204ENST00000591247 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
LSM12-204ENST00000591247 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
LSM12-204ENST00000591247 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
LSM12-204ENST00000591247 NEBP20929 6669 aa4.8□□□□□ -1.64
LSM12-204ENST00000591247 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
LSM12-204ENST00000591247 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
LSM12-204ENST00000591247 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
LSM12-204ENST00000591247 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
LSM12-204ENST00000591247 PRM1P04553 51 aa4.63□□□□□ -1.67
LSM12-204ENST00000591247 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
LSM12-204ENST00000591247 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
LSM12-204ENST00000591247 MT3P25713 68 aa4.51□□□□□ -1.69
LSM12-204ENST00000591247 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
LSM12-204ENST00000591247 MT4P47944 62 aa4.38□□□□□ -1.71
LSM12-204ENST00000591247 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
LSM12-204ENST00000591247 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
LSM12-204ENST00000591247 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
LSM12-204ENST00000591247 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
LSM12-204ENST00000591247 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
LSM12-204ENST00000591247 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
LSM12-204ENST00000591247 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
LSM12-204ENST00000591247 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
LSM12-204ENST00000591247 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
LSM12-204ENST00000591247 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
LSM12-204ENST00000591247 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
LSM12-204ENST00000591247 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
LSM12-204ENST00000591247 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
LSM12-204ENST00000591247 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
LSM12-204ENST00000591247 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
LSM12-204ENST00000591247 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
LSM12-204ENST00000591247 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
LSM12-204ENST00000591247 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
LSM12-204ENST00000591247 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
LSM12-204ENST00000591247 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LSM12-204ENST00000591247 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
LSM12-204ENST00000591247 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
LSM12-204ENST00000591247 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
LSM12-204ENST00000591247 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
LSM12-204ENST00000591247 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
LSM12-204ENST00000591247 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
LSM12-204ENST00000591247 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.92
LSM12-204ENST00000591247 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
LSM12-204ENST00000591247 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
LSM12-204ENST00000591247 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
LSM12-204ENST00000591247 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
LSM12-204ENST00000591247 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms