RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
CIRBP-228ENST00000590347 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
CIRBP-228ENST00000590347 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
CIRBP-228ENST00000590347 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CIRBP-228ENST00000590347 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
CIRBP-228ENST00000590347 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
CIRBP-228ENST00000590347 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
CIRBP-228ENST00000590347 MT1LQ93083 61 aa4.91□□□□□ -1.62
CIRBP-228ENST00000590347 MT1GP13640 62 aa4.9□□□□□ -1.62
CIRBP-228ENST00000590347 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.62
CIRBP-228ENST00000590347 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
CIRBP-228ENST00000590347 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
CIRBP-228ENST00000590347 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
CIRBP-228ENST00000590347 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
CIRBP-228ENST00000590347 MT1EP04732 61 aa4.83□□□□□ -1.64
CIRBP-228ENST00000590347 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
CIRBP-228ENST00000590347 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
CIRBP-228ENST00000590347 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
CIRBP-228ENST00000590347 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
CIRBP-228ENST00000590347 PRM1P04553 51 aa4.64□□□□□ -1.67
CIRBP-228ENST00000590347 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
CIRBP-228ENST00000590347 MT1MQ8N339 61 aa4.54□□□□□ -1.68
CIRBP-228ENST00000590347 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
CIRBP-228ENST00000590347 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
CIRBP-228ENST00000590347 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
CIRBP-228ENST00000590347 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CIRBP-228ENST00000590347 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
CIRBP-228ENST00000590347 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
CIRBP-228ENST00000590347 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CIRBP-228ENST00000590347 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
CIRBP-228ENST00000590347 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
CIRBP-228ENST00000590347 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
CIRBP-228ENST00000590347 SPRR2EP22531 72 aa4.29□□□□□ -1.72
CIRBP-228ENST00000590347 SPRR2BP35325 72 aa4.29□□□□□ -1.72
CIRBP-228ENST00000590347 SPRR2AP35326 72 aa4.29□□□□□ -1.72
CIRBP-228ENST00000590347 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
CIRBP-228ENST00000590347 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
CIRBP-228ENST00000590347 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
CIRBP-228ENST00000590347 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
CIRBP-228ENST00000590347 MT1AP04731 61 aa4.17□□□□□ -1.74
CIRBP-228ENST00000590347 SPRR2DP22532 72 aa4.09□□□□□ -1.75
CIRBP-228ENST00000590347 LCE1DQ5T752 114 aa4□□□□□ -1.77
CIRBP-228ENST00000590347 NEBP20929 6669 aa3.96□□□□□ -1.77
CIRBP-228ENST00000590347 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CIRBP-228ENST00000590347 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
CIRBP-228ENST00000590347 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
CIRBP-228ENST00000590347 MT4P47944 62 aa3.75□□□□□ -1.81
CIRBP-228ENST00000590347 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
CIRBP-228ENST00000590347 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
CIRBP-228ENST00000590347 MT3P25713 68 aa3.61□□□□□ -1.83
CIRBP-228ENST00000590347 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
CIRBP-228ENST00000590347 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
CIRBP-228ENST00000590347 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CIRBP-228ENST00000590347 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
CIRBP-228ENST00000590347 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
CIRBP-228ENST00000590347 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
CIRBP-228ENST00000590347 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
CIRBP-228ENST00000590347 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
CIRBP-228ENST00000590347 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
CIRBP-228ENST00000590347 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
CIRBP-228ENST00000590347 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
CIRBP-228ENST00000590347 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CIRBP-228ENST00000590347 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CIRBP-228ENST00000590347 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CIRBP-228ENST00000590347 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
CIRBP-228ENST00000590347 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
CIRBP-228ENST00000590347 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CIRBP-228ENST00000590347 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
CIRBP-228ENST00000590347 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CIRBP-228ENST00000590347 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CIRBP-228ENST00000590347 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CIRBP-228ENST00000590347 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
CIRBP-228ENST00000590347 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
CIRBP-228ENST00000590347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
CIRBP-228ENST00000590347 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
CIRBP-228ENST00000590347 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CIRBP-228ENST00000590347 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
CIRBP-228ENST00000590347 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms