RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PSPHP1O15172 72 aa4.27□□□□□ -1.73
TPM4-212ENST00000590180 PCP4P48539 62 aa4.27□□□□□ -1.73
TPM4-212ENST00000590180 MT1MQ8N339 61 aa4.27□□□□□ -1.73
TPM4-212ENST00000590180 K7ERS5 55 aa4.26□□□□□ -1.73
TPM4-212ENST00000590180 Q1T7F1 81 aa4.23□□□□□ -1.73
TPM4-212ENST00000590180 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
TPM4-212ENST00000590180 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
TPM4-212ENST00000590180 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
TPM4-212ENST00000590180 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
TPM4-212ENST00000590180 A6NED7 52 aa4.13□□□□□ -1.75
TPM4-212ENST00000590180 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
TPM4-212ENST00000590180 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
TPM4-212ENST00000590180 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
TPM4-212ENST00000590180 MT4P47944 62 aa4.1□□□□□ -1.75
TPM4-212ENST00000590180 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
TPM4-212ENST00000590180 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
TPM4-212ENST00000590180 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
TPM4-212ENST00000590180 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
TPM4-212ENST00000590180 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
TPM4-212ENST00000590180 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
TPM4-212ENST00000590180 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
TPM4-212ENST00000590180 ROMO1P60602 79 aa3.95□□□□□ -1.78
TPM4-212ENST00000590180 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
TPM4-212ENST00000590180 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
TPM4-212ENST00000590180 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
TPM4-212ENST00000590180 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
TPM4-212ENST00000590180 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
TPM4-212ENST00000590180 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
TPM4-212ENST00000590180 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TPM4-212ENST00000590180 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
TPM4-212ENST00000590180 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
TPM4-212ENST00000590180 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
TPM4-212ENST00000590180 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
TPM4-212ENST00000590180 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
TPM4-212ENST00000590180 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
TPM4-212ENST00000590180 MT1AP04731 61 aa3.66□□□□□ -1.82
TPM4-212ENST00000590180 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
TPM4-212ENST00000590180 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
TPM4-212ENST00000590180 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
TPM4-212ENST00000590180 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
TPM4-212ENST00000590180 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
TPM4-212ENST00000590180 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
TPM4-212ENST00000590180 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
TPM4-212ENST00000590180 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TPM4-212ENST00000590180 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
TPM4-212ENST00000590180 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
TPM4-212ENST00000590180 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
TPM4-212ENST00000590180 MT3P25713 68 aa3.37□□□□□ -1.87
TPM4-212ENST00000590180 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
TPM4-212ENST00000590180 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
TPM4-212ENST00000590180 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
TPM4-212ENST00000590180 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
TPM4-212ENST00000590180 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
TPM4-212ENST00000590180 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
TPM4-212ENST00000590180 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
TPM4-212ENST00000590180 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
TPM4-212ENST00000590180 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
TPM4-212ENST00000590180 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
TPM4-212ENST00000590180 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
TPM4-212ENST00000590180 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TPM4-212ENST00000590180 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
TPM4-212ENST00000590180 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
TPM4-212ENST00000590180 H3BS24 57 aa2.7□□□□□ -1.98
TPM4-212ENST00000590180 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
TPM4-212ENST00000590180 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
TPM4-212ENST00000590180 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
TPM4-212ENST00000590180 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
TPM4-212ENST00000590180 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
TPM4-212ENST00000590180 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
TPM4-212ENST00000590180 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
TPM4-212ENST00000590180 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
TPM4-212ENST00000590180 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
TPM4-212ENST00000590180 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
TPM4-212ENST00000590180 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TPM4-212ENST00000590180 INE1O15225 51 aa2.08□□□□□ -2.08
TPM4-212ENST00000590180 PRM1P04553 51 aa2.02□□□□□ -2.09
TPM4-212ENST00000590180 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TPM4-212ENST00000590180 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms