RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
PRKCSH-209ENST00000589838 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
PRKCSH-209ENST00000589838 MT1GP13640 62 aa6.39□□□□□ -1.39
PRKCSH-209ENST00000589838 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
PRKCSH-209ENST00000589838 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
PRKCSH-209ENST00000589838 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
PRKCSH-209ENST00000589838 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
PRKCSH-209ENST00000589838 MT1MQ8N339 61 aa6.33□□□□□ -1.4
PRKCSH-209ENST00000589838 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
PRKCSH-209ENST00000589838 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
PRKCSH-209ENST00000589838 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
PRKCSH-209ENST00000589838 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
PRKCSH-209ENST00000589838 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
PRKCSH-209ENST00000589838 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
PRKCSH-209ENST00000589838 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
PRKCSH-209ENST00000589838 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
PRKCSH-209ENST00000589838 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
PRKCSH-209ENST00000589838 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
PRKCSH-209ENST00000589838 KRTAP5-9P26371 169 aa5.94□□□□□ -1.46
PRKCSH-209ENST00000589838 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
PRKCSH-209ENST00000589838 SPRR2EP22531 72 aa5.77□□□□□ -1.49
PRKCSH-209ENST00000589838 SPRR2BP35325 72 aa5.77□□□□□ -1.49
PRKCSH-209ENST00000589838 SPRR2AP35326 72 aa5.77□□□□□ -1.49
PRKCSH-209ENST00000589838 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
PRKCSH-209ENST00000589838 MT1AP04731 61 aa5.7□□□□□ -1.5
PRKCSH-209ENST00000589838 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
PRKCSH-209ENST00000589838 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
PRKCSH-209ENST00000589838 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
PRKCSH-209ENST00000589838 NEBP20929 6669 aa5.62□□□□□ -1.51
PRKCSH-209ENST00000589838 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
PRKCSH-209ENST00000589838 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
PRKCSH-209ENST00000589838 SPRR2DP22532 72 aa5.54□□□□□ -1.52
PRKCSH-209ENST00000589838 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
PRKCSH-209ENST00000589838 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
PRKCSH-209ENST00000589838 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
PRKCSH-209ENST00000589838 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
PRKCSH-209ENST00000589838 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
PRKCSH-209ENST00000589838 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
PRKCSH-209ENST00000589838 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
PRKCSH-209ENST00000589838 MT3P25713 68 aa5.16□□□□□ -1.58
PRKCSH-209ENST00000589838 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
PRKCSH-209ENST00000589838 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
PRKCSH-209ENST00000589838 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
PRKCSH-209ENST00000589838 PRM1P04553 51 aa4.86□□□□□ -1.63
PRKCSH-209ENST00000589838 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
PRKCSH-209ENST00000589838 MT4P47944 62 aa4.79□□□□□ -1.64
PRKCSH-209ENST00000589838 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
PRKCSH-209ENST00000589838 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
PRKCSH-209ENST00000589838 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
PRKCSH-209ENST00000589838 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
PRKCSH-209ENST00000589838 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
PRKCSH-209ENST00000589838 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
PRKCSH-209ENST00000589838 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
PRKCSH-209ENST00000589838 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
PRKCSH-209ENST00000589838 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
PRKCSH-209ENST00000589838 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
PRKCSH-209ENST00000589838 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
PRKCSH-209ENST00000589838 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
PRKCSH-209ENST00000589838 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
PRKCSH-209ENST00000589838 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
PRKCSH-209ENST00000589838 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
PRKCSH-209ENST00000589838 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
PRKCSH-209ENST00000589838 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
PRKCSH-209ENST00000589838 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
PRKCSH-209ENST00000589838 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
PRKCSH-209ENST00000589838 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
PRKCSH-209ENST00000589838 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
PRKCSH-209ENST00000589838 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
PRKCSH-209ENST00000589838 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
PRKCSH-209ENST00000589838 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
PRKCSH-209ENST00000589838 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PRKCSH-209ENST00000589838 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
PRKCSH-209ENST00000589838 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
PRKCSH-209ENST00000589838 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PRKCSH-209ENST00000589838 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
PRKCSH-209ENST00000589838 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
PRKCSH-209ENST00000589838 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 92 ms