RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
PIK3C3-211ENST00000589550 MT1HL1P0DM35 61 aa0.96□□□□□ -2.26
PIK3C3-211ENST00000589550 BIRC6Q9NR09 4857 aa0.96□□□□□ -2.26
PIK3C3-211ENST00000589550 DNAH5Q8TE73 4624 aa0.96□□□□□ -2.26
PIK3C3-211ENST00000589550 APOBP04114 4563 aaKnown RBP0.96□□□□□ -2.26
PIK3C3-211ENST00000589550 RYR1P21817 5038 aa0.95□□□□□ -2.26
PIK3C3-211ENST00000589550 DYNC1H1Q14204 4646 aaKnown RBP0.95□□□□□ -2.26
PIK3C3-211ENST00000589550 FLGP20930 4061 aaPredicted RBP0.95□□□□□ -2.26
PIK3C3-211ENST00000589550 FAT3Q8TDW7 4589 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 FAT1Q14517 4588 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 HERC2O95714 4834 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
PIK3C3-211ENST00000589550 ABCA13Q86UQ4 5058 aa0.93□□□□□ -2.26
PIK3C3-211ENST00000589550 DMBT1Q9UGM3 2413 aaPredicted RBP0.92□□□□□ -2.26
PIK3C3-211ENST00000589550 GPR98Q8WXG9 6306 aa0.92□□□□□ -2.26
PIK3C3-211ENST00000589550 HERC1Q15751 4861 aa0.91□□□□□ -2.26
PIK3C3-211ENST00000589550 M0R2T5 61 aa0.91□□□□□ -2.26
PIK3C3-211ENST00000589550 LRP1Q07954 4544 aaKnown RBP0.9□□□□□ -2.27
PIK3C3-211ENST00000589550 RNF213Q63HN8 5207 aa0.89□□□□□ -2.27
PIK3C3-211ENST00000589550 UBR4Q5T4S7 5183 aa0.89□□□□□ -2.27
PIK3C3-211ENST00000589550 TNXBP22105 4242 aa0.88□□□□□ -2.27
PIK3C3-211ENST00000589550 HMCN2Q8NDA2 5059 aa0.88□□□□□ -2.27
PIK3C3-211ENST00000589550 MUC2Q02817 5179 aa0.87□□□□□ -2.27
PIK3C3-211ENST00000589550 LPAP08519 4548 aa0.86□□□□□ -2.27
PIK3C3-211ENST00000589550 LRP2P98164 4655 aa0.85□□□□□ -2.27
PIK3C3-211ENST00000589550 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.27
PIK3C3-211ENST00000589550 MT1HP80294 61 aa0.83□□□□□ -2.28
PIK3C3-211ENST00000589550 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
PIK3C3-211ENST00000589550 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
PIK3C3-211ENST00000589550 M0QZ58 72 aa0.82□□□□□ -2.28
PIK3C3-211ENST00000589550 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
PIK3C3-211ENST00000589550 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
PIK3C3-211ENST00000589550 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
PIK3C3-211ENST00000589550 FAT4Q6V0I7 4981 aa0.79□□□□□ -2.28
PIK3C3-211ENST00000589550 KRTAP19-2Q3LHN2 52 aa0.79□□□□□ -2.28
PIK3C3-211ENST00000589550 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
PIK3C3-211ENST00000589550 MT2AP02795 61 aa0.77□□□□□ -2.29
PIK3C3-211ENST00000589550 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
PIK3C3-211ENST00000589550 MT1FP04733 61 aa0.76□□□□□ -2.29
PIK3C3-211ENST00000589550 SPRR2GQ9BYE4 73 aa0.76□□□□□ -2.29
PIK3C3-211ENST00000589550 MACF1Q9UPN3 7388 aaKnown RBP0.76□□□□□ -2.29
PIK3C3-211ENST00000589550 TNP1P09430 55 aa0.73□□□□□ -2.29
PIK3C3-211ENST00000589550 USH2AO75445 5202 aa0.73□□□□□ -2.29
PIK3C3-211ENST00000589550 KRTAP19-8Q3LI54 63 aa0.72□□□□□ -2.29
PIK3C3-211ENST00000589550 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
PIK3C3-211ENST00000589550 PRM1P04553 51 aa0.71□□□□□ -2.3
PIK3C3-211ENST00000589550 KRTAP19-6Q3LI70 58 aa0.71□□□□□ -2.3
PIK3C3-211ENST00000589550 MT1BP07438 61 aa0.7□□□□□ -2.3
PIK3C3-211ENST00000589550 KRTAP8-1Q8IUC2 63 aa0.69□□□□□ -2.3
PIK3C3-211ENST00000589550 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
PIK3C3-211ENST00000589550 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
PIK3C3-211ENST00000589550 MT1XP80297 61 aa0.67□□□□□ -2.3
PIK3C3-211ENST00000589550 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
PIK3C3-211ENST00000589550 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
PIK3C3-211ENST00000589550 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
PIK3C3-211ENST00000589550 SPRR2EP22531 72 aa0.64□□□□□ -2.31
PIK3C3-211ENST00000589550 SPRR2BP35325 72 aa0.64□□□□□ -2.31
PIK3C3-211ENST00000589550 SPRR2AP35326 72 aa0.64□□□□□ -2.31
PIK3C3-211ENST00000589550 KMT2DO14686 5537 aa0.63□□□□□ -2.31
PIK3C3-211ENST00000589550 NEBP20929 6669 aa0.63□□□□□ -2.31
PIK3C3-211ENST00000589550 MT1GP13640 62 aa0.62□□□□□ -2.31
PIK3C3-211ENST00000589550 SPRR2DP22532 72 aa0.62□□□□□ -2.31
PIK3C3-211ENST00000589550 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
PIK3C3-211ENST00000589550 MUC12Q9UKN1 5478 aa0.62□□□□□ -2.31
PIK3C3-211ENST00000589550 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
PIK3C3-211ENST00000589550 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
PIK3C3-211ENST00000589550 MT1EP04732 61 aa0.6□□□□□ -2.31
PIK3C3-211ENST00000589550 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
PIK3C3-211ENST00000589550 MT1LQ93083 61 aa0.58□□□□□ -2.32
PIK3C3-211ENST00000589550 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
PIK3C3-211ENST00000589550 MT1MQ8N339 61 aa0.57□□□□□ -2.32
PIK3C3-211ENST00000589550 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
PIK3C3-211ENST00000589550 MT1AP04731 61 aa0.54□□□□□ -2.32
PIK3C3-211ENST00000589550 MT4P47944 62 aa0.54□□□□□ -2.32
PIK3C3-211ENST00000589550 KRTAP20-2Q3LI61 65 aa0.49□□□□□ -2.33
PIK3C3-211ENST00000589550 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms