RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 MT1MQ8N339 61 aa5.89□□□□□ -1.47
NFIC-208ENST00000589537 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
NFIC-208ENST00000589537 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
NFIC-208ENST00000589537 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
NFIC-208ENST00000589537 RPS28P62857 69 aaKnown RBP5.75□□□□□ -1.49
NFIC-208ENST00000589537 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
NFIC-208ENST00000589537 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
NFIC-208ENST00000589537 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
NFIC-208ENST00000589537 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
NFIC-208ENST00000589537 K7ERS5 55 aa5.72□□□□□ -1.49
NFIC-208ENST00000589537 V9GYY9 64 aa5.71□□□□□ -1.5
NFIC-208ENST00000589537 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
NFIC-208ENST00000589537 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
NFIC-208ENST00000589537 MT4P47944 62 aa5.64□□□□□ -1.51
NFIC-208ENST00000589537 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
NFIC-208ENST00000589537 Q1T7F1 81 aa5.61□□□□□ -1.51
NFIC-208ENST00000589537 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
NFIC-208ENST00000589537 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
NFIC-208ENST00000589537 PSPHP1O15172 72 aa5.58□□□□□ -1.52
NFIC-208ENST00000589537 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
NFIC-208ENST00000589537 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
NFIC-208ENST00000589537 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
NFIC-208ENST00000589537 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
NFIC-208ENST00000589537 A6NED7 52 aa5.44□□□□□ -1.54
NFIC-208ENST00000589537 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
NFIC-208ENST00000589537 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
NFIC-208ENST00000589537 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
NFIC-208ENST00000589537 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
NFIC-208ENST00000589537 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
NFIC-208ENST00000589537 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
NFIC-208ENST00000589537 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
NFIC-208ENST00000589537 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
NFIC-208ENST00000589537 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
NFIC-208ENST00000589537 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
NFIC-208ENST00000589537 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
NFIC-208ENST00000589537 ROMO1P60602 79 aa5.26□□□□□ -1.57
NFIC-208ENST00000589537 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
NFIC-208ENST00000589537 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.59
NFIC-208ENST00000589537 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
NFIC-208ENST00000589537 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
NFIC-208ENST00000589537 H3BS24 57 aa5.07□□□□□ -1.6
NFIC-208ENST00000589537 MT1AP04731 61 aa5.05□□□□□ -1.6
NFIC-208ENST00000589537 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
NFIC-208ENST00000589537 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
NFIC-208ENST00000589537 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
NFIC-208ENST00000589537 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
NFIC-208ENST00000589537 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
NFIC-208ENST00000589537 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
NFIC-208ENST00000589537 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
NFIC-208ENST00000589537 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
NFIC-208ENST00000589537 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
NFIC-208ENST00000589537 MT3P25713 68 aa4.64□□□□□ -1.67
NFIC-208ENST00000589537 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
NFIC-208ENST00000589537 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
NFIC-208ENST00000589537 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
NFIC-208ENST00000589537 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
NFIC-208ENST00000589537 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
NFIC-208ENST00000589537 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
NFIC-208ENST00000589537 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
NFIC-208ENST00000589537 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
NFIC-208ENST00000589537 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
NFIC-208ENST00000589537 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
NFIC-208ENST00000589537 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
NFIC-208ENST00000589537 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
NFIC-208ENST00000589537 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
NFIC-208ENST00000589537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
NFIC-208ENST00000589537 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
NFIC-208ENST00000589537 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
NFIC-208ENST00000589537 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
NFIC-208ENST00000589537 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
NFIC-208ENST00000589537 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
NFIC-208ENST00000589537 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
NFIC-208ENST00000589537 INE1O15225 51 aa2.98□□□□□ -1.93
NFIC-208ENST00000589537 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
NFIC-208ENST00000589537 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
NFIC-208ENST00000589537 PRM1P04553 51 aa2.66□□□□□ -1.98
NFIC-208ENST00000589537 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
NFIC-208ENST00000589537 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 142.1 ms