RNA–Protein interactions for RNA: ENST00000588879.5

RANBP3-215, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-215	ENST00000588879	KRTAP4-9	Q9BYQ8	210 aa		6.41	□□□□□ -1.38
RANBP3-215	ENST00000588879	KRTAP12-3	P60328	96 aa		6.36	□□□□□ -1.39
RANBP3-215	ENST00000588879		V9GYY9	64 aa		6.35	□□□□□ -1.39
RANBP3-215	ENST00000588879	KRTAP4-3	Q9BYR4	195 aa		6.34	□□□□□ -1.39
RANBP3-215	ENST00000588879	LCE4A	Q5TA78	99 aa		6.33	□□□□□ -1.4
RANBP3-215	ENST00000588879		Q1T7F1	81 aa		6.32	□□□□□ -1.4
RANBP3-215	ENST00000588879	KRTAP25-1	Q3LHN0	102 aa		6.31	□□□□□ -1.4
RANBP3-215	ENST00000588879	LCE1D	Q5T752	114 aa		6.3	□□□□□ -1.4
RANBP3-215	ENST00000588879	PSPHP1	O15172	72 aa		6.28	□□□□□ -1.4
RANBP3-215	ENST00000588879		K7ERS5	55 aa		6.27	□□□□□ -1.41
RANBP3-215	ENST00000588879	KRTAP5-4	Q6L8H1	288 aa		6.24	□□□□□ -1.41
RANBP3-215	ENST00000588879	HMCN1	Q96RW7	5635 aa		6.23	□□□□□ -1.41
RANBP3-215	ENST00000588879	GPR98	Q8WXG9	6306 aa		6.22	□□□□□ -1.41
RANBP3-215	ENST00000588879	KRTAP4-7	Q9BYR0	210 aa		6.21	□□□□□ -1.42
RANBP3-215	ENST00000588879	MT4	P47944	62 aa		6.19	□□□□□ -1.42
RANBP3-215	ENST00000588879	KRTAP23-1	A1A580	65 aa		6.12	□□□□□ -1.43
RANBP3-215	ENST00000588879	KRTAP19-4	Q3LI73	84 aa		6.08	□□□□□ -1.44
RANBP3-215	ENST00000588879		A6NED7	52 aa		6.07	□□□□□ -1.44
RANBP3-215	ENST00000588879	KRTAP4-6	Q9BYQ5	205 aa		6.06	□□□□□ -1.44
RANBP3-215	ENST00000588879	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.02	□□□□□ -1.45
RANBP3-215	ENST00000588879	RPS28	P62857	69 aa	Known RBP	6	□□□□□ -1.45
RANBP3-215	ENST00000588879	AHNAK2	Q8IVF2	5795 aa		5.98	□□□□□ -1.45
RANBP3-215	ENST00000588879	KRTAP15-1	Q3LI76	137 aa		5.96	□□□□□ -1.46
RANBP3-215	ENST00000588879	CDC42SE1	Q9NRR8	79 aa		5.95	□□□□□ -1.46
RANBP3-215	ENST00000588879	LOC100996750	A0A140TA64	210 aa		5.88	□□□□□ -1.47
RANBP3-215	ENST00000588879	SPRR5	A0A1B0GTR4	108 aa		5.87	□□□□□ -1.47
RANBP3-215	ENST00000588879	ROMO1	P60602	79 aa		5.87	□□□□□ -1.47
RANBP3-215	ENST00000588879	LCE3C	Q5T5A8	94 aa		5.87	□□□□□ -1.47
RANBP3-215	ENST00000588879	KRTAP20-2	Q3LI61	65 aa		5.86	□□□□□ -1.47
RANBP3-215	ENST00000588879	KRTAP5-10	Q6L8G5	202 aa		5.86	□□□□□ -1.47
RANBP3-215	ENST00000588879	PCP4	P48539	62 aa		5.85	□□□□□ -1.47
RANBP3-215	ENST00000588879	KRTAP12-4	P60329	112 aa		5.81	□□□□□ -1.48
RANBP3-215	ENST00000588879	KRTAP5-3	Q6L8H2	238 aa		5.72	□□□□□ -1.49
RANBP3-215	ENST00000588879	SYNE1	Q8NF91	8797 aa	Known RBP	5.71	□□□□□ -1.49
RANBP3-215	ENST00000588879	KRTAP5-7	Q6L8G8	165 aa		5.63	□□□□□ -1.51
RANBP3-215	ENST00000588879	MT1A	P04731	61 aa		5.59	□□□□□ -1.51
RANBP3-215	ENST00000588879	KRTAP9-6	A8MVA2	160 aa		5.54	□□□□□ -1.52
RANBP3-215	ENST00000588879	KRTAP6-1	Q3LI64	71 aa		5.54	□□□□□ -1.52
RANBP3-215	ENST00000588879	KRTAP5-2	Q701N4	177 aa		5.48	□□□□□ -1.53
RANBP3-215	ENST00000588879	KRTAP9-4	Q9BYQ2	154 aa		5.41	□□□□□ -1.54
RANBP3-215	ENST00000588879	KRTAP4-11	Q9BYQ6	195 aa		5.34	□□□□□ -1.55
RANBP3-215	ENST00000588879	KRTAP6-2	Q3LI66	62 aa		5.29	□□□□□ -1.56
RANBP3-215	ENST00000588879	BRK1	Q8WUW1	75 aa		5.19	□□□□□ -1.58
RANBP3-215	ENST00000588879	KRTAP5-8	O75690	187 aa		5.17	□□□□□ -1.58
RANBP3-215	ENST00000588879	MT3	P25713	68 aa		5.11	□□□□□ -1.59
RANBP3-215	ENST00000588879	OBSCN	Q5VST9	7968 aa		5	□□□□□ -1.61
RANBP3-215	ENST00000588879	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.92	□□□□□ -1.62
RANBP3-215	ENST00000588879	AHNAK	Q09666	5890 aa	Known RBP	4.9	□□□□□ -1.62
RANBP3-215	ENST00000588879	KRTAP5-1	Q6L8H4	278 aa		4.9	□□□□□ -1.63
RANBP3-215	ENST00000588879	MUC5AC	P98088	5654 aa		4.9	□□□□□ -1.63
RANBP3-215	ENST00000588879	PMAIP1	Q13794	54 aa		4.89	□□□□□ -1.63
RANBP3-215	ENST00000588879	KRTAP9-9	Q9BYP9	154 aa		4.87	□□□□□ -1.63
RANBP3-215	ENST00000588879	LCE1E	Q5T753	118 aa		4.72	□□□□□ -1.65
RANBP3-215	ENST00000588879	PRAC1	Q96KF2	57 aa		4.71	□□□□□ -1.66
RANBP3-215	ENST00000588879	PRO0628	Q9UI54	55 aa		4.52	□□□□□ -1.69
RANBP3-215	ENST00000588879	KRTAP4-2	Q9BYR5	136 aa		4.43	□□□□□ -1.7
RANBP3-215	ENST00000588879	LCE1C	Q5T751	118 aa		4.37	□□□□□ -1.71
RANBP3-215	ENST00000588879	LCE1B	Q5T7P3	118 aa		4.37	□□□□□ -1.71
RANBP3-215	ENST00000588879	KTN1-AS1	Q86SY8	53 aa		4.33	□□□□□ -1.72
RANBP3-215	ENST00000588879	LCE3D	Q9BYE3	92 aa		4.23	□□□□□ -1.73
RANBP3-215	ENST00000588879	SVIP	Q8NHG7	77 aa		4.1	□□□□□ -1.75
RANBP3-215	ENST00000588879	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.01	□□□□□ -1.77
RANBP3-215	ENST00000588879	LUZP6	Q538Z0	58 aa		3.98	□□□□□ -1.77
RANBP3-215	ENST00000588879	LCE3E	Q5T5B0	92 aa		3.98	□□□□□ -1.77
RANBP3-215	ENST00000588879	KRTAP5-11	Q6L8G4	156 aa		3.96	□□□□□ -1.78
RANBP3-215	ENST00000588879	KRTAP4-12	Q9BQ66	201 aa		3.95	□□□□□ -1.78
RANBP3-215	ENST00000588879	LCE1F	Q5T754	118 aa		3.86	□□□□□ -1.79
RANBP3-215	ENST00000588879	KRTAP21-2	Q3LI59	83 aa		3.67	□□□□□ -1.82
RANBP3-215	ENST00000588879	PHGR1	C9JFL3	82 aa		3.41	□□□□□ -1.86
RANBP3-215	ENST00000588879		H3BS24	57 aa		3.35	□□□□□ -1.87
RANBP3-215	ENST00000588879	KRTAP4-4	Q9BYR3	166 aa		3.3	□□□□□ -1.88
RANBP3-215	ENST00000588879	NDUFAF8	A1L188	74 aa		3.13	□□□□□ -1.91
RANBP3-215	ENST00000588879	MUC19	Q7Z5P9	8384 aa		3.08	□□□□□ -1.92
RANBP3-215	ENST00000588879	PRM1	P04553	51 aa		2.99	□□□□□ -1.93
RANBP3-215	ENST00000588879	KRTAP21-1	Q3LI58	79 aa		2.58	□□□□□ -2
RANBP3-215	ENST00000588879	INE1	O15225	51 aa		2.54	□□□□□ -2
RANBP3-215	ENST00000588879		A0A0A0MQY5	61 aa		2.42	□□□□□ -2.02
RANBP3-215	ENST00000588879	MUC16	Q8WXI7	14507 aa		2.23	□□□□□ -2.05

Retrieved 78 of 20,778 RNA–protein pairs in 102.2 ms