RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
HDAC5-209ENST00000588703 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
HDAC5-209ENST00000588703 V9GYY9 64 aa6.32□□□□□ -1.4
HDAC5-209ENST00000588703 Q1T7F1 81 aa6.28□□□□□ -1.4
HDAC5-209ENST00000588703 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
HDAC5-209ENST00000588703 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
HDAC5-209ENST00000588703 UQCR11O14957 56 aa6.23□□□□□ -1.41
HDAC5-209ENST00000588703 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
HDAC5-209ENST00000588703 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
HDAC5-209ENST00000588703 MT4P47944 62 aa6.17□□□□□ -1.42
HDAC5-209ENST00000588703 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
HDAC5-209ENST00000588703 PSPHP1O15172 72 aa6.16□□□□□ -1.42
HDAC5-209ENST00000588703 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
HDAC5-209ENST00000588703 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
HDAC5-209ENST00000588703 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
HDAC5-209ENST00000588703 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
HDAC5-209ENST00000588703 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
HDAC5-209ENST00000588703 A6NED7 52 aa6□□□□□ -1.45
HDAC5-209ENST00000588703 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
HDAC5-209ENST00000588703 K7ERS5 55 aa5.94□□□□□ -1.46
HDAC5-209ENST00000588703 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
HDAC5-209ENST00000588703 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
HDAC5-209ENST00000588703 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
HDAC5-209ENST00000588703 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
HDAC5-209ENST00000588703 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
HDAC5-209ENST00000588703 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
HDAC5-209ENST00000588703 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
HDAC5-209ENST00000588703 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
HDAC5-209ENST00000588703 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
HDAC5-209ENST00000588703 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
HDAC5-209ENST00000588703 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
HDAC5-209ENST00000588703 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
HDAC5-209ENST00000588703 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
HDAC5-209ENST00000588703 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
HDAC5-209ENST00000588703 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
HDAC5-209ENST00000588703 ROMO1P60602 79 aa5.57□□□□□ -1.52
HDAC5-209ENST00000588703 MT1AP04731 61 aa5.46□□□□□ -1.54
HDAC5-209ENST00000588703 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
HDAC5-209ENST00000588703 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
HDAC5-209ENST00000588703 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
HDAC5-209ENST00000588703 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
HDAC5-209ENST00000588703 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
HDAC5-209ENST00000588703 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
HDAC5-209ENST00000588703 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
HDAC5-209ENST00000588703 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
HDAC5-209ENST00000588703 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
HDAC5-209ENST00000588703 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
HDAC5-209ENST00000588703 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
HDAC5-209ENST00000588703 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
HDAC5-209ENST00000588703 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
HDAC5-209ENST00000588703 MT3P25713 68 aa4.97□□□□□ -1.61
HDAC5-209ENST00000588703 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
HDAC5-209ENST00000588703 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
HDAC5-209ENST00000588703 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
HDAC5-209ENST00000588703 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
HDAC5-209ENST00000588703 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
HDAC5-209ENST00000588703 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
HDAC5-209ENST00000588703 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
HDAC5-209ENST00000588703 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
HDAC5-209ENST00000588703 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
HDAC5-209ENST00000588703 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
HDAC5-209ENST00000588703 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
HDAC5-209ENST00000588703 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
HDAC5-209ENST00000588703 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
HDAC5-209ENST00000588703 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
HDAC5-209ENST00000588703 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
HDAC5-209ENST00000588703 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
HDAC5-209ENST00000588703 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
HDAC5-209ENST00000588703 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
HDAC5-209ENST00000588703 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
HDAC5-209ENST00000588703 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
HDAC5-209ENST00000588703 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
HDAC5-209ENST00000588703 INE1O15225 51 aa3.13□□□□□ -1.91
HDAC5-209ENST00000588703 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
HDAC5-209ENST00000588703 PRM1P04553 51 aa2.86□□□□□ -1.95
HDAC5-209ENST00000588703 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
HDAC5-209ENST00000588703 H3BS24 57 aa2.58□□□□□ -2
HDAC5-209ENST00000588703 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 89.5 ms