RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
GPATCH8-206ENST00000588554 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
GPATCH8-206ENST00000588554 J3QR89 54 aa2.79□□□□□ -1.96
GPATCH8-206ENST00000588554 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
GPATCH8-206ENST00000588554 A0A0D9SG42 100 aa2.76□□□□□ -1.97
GPATCH8-206ENST00000588554 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
GPATCH8-206ENST00000588554 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
GPATCH8-206ENST00000588554 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
GPATCH8-206ENST00000588554 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
GPATCH8-206ENST00000588554 MT4P47944 62 aa2.72□□□□□ -1.97
GPATCH8-206ENST00000588554 MT1GP13640 62 aa2.71□□□□□ -1.98
GPATCH8-206ENST00000588554 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
GPATCH8-206ENST00000588554 SPANXA2-OT1Q8N9U9 137 aa2.7□□□□□ -1.98
GPATCH8-206ENST00000588554 MT1MQ8N339 61 aa2.69□□□□□ -1.98
GPATCH8-206ENST00000588554 COA5Q86WW8 74 aa2.68□□□□□ -1.98
GPATCH8-206ENST00000588554 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
GPATCH8-206ENST00000588554 MT1LQ93083 61 aa2.67□□□□□ -1.98
GPATCH8-206ENST00000588554 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
GPATCH8-206ENST00000588554 A0A1B0GU33 70 aa2.65□□□□□ -1.99
GPATCH8-206ENST00000588554 K7ERU9 68 aa2.65□□□□□ -1.99
GPATCH8-206ENST00000588554 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
GPATCH8-206ENST00000588554 SERP2Q8N6R1 65 aa2.65□□□□□ -1.99
GPATCH8-206ENST00000588554 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
GPATCH8-206ENST00000588554 SEC61GP60059 68 aa2.63□□□□□ -1.99
GPATCH8-206ENST00000588554 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
GPATCH8-206ENST00000588554 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
GPATCH8-206ENST00000588554 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
GPATCH8-206ENST00000588554 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
GPATCH8-206ENST00000588554 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
GPATCH8-206ENST00000588554 H7BZZ5 65 aa2.54□□□□□ -2
GPATCH8-206ENST00000588554 SMIM26A0A096LP01 95 aa2.53□□□□□ -2
GPATCH8-206ENST00000588554 A0A1B0GU69 56 aa2.53□□□□□ -2
GPATCH8-206ENST00000588554 TNP1P09430 55 aa2.53□□□□□ -2
GPATCH8-206ENST00000588554 COX7CP15954 63 aa2.53□□□□□ -2
GPATCH8-206ENST00000588554 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
GPATCH8-206ENST00000588554 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
GPATCH8-206ENST00000588554 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
GPATCH8-206ENST00000588554 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
GPATCH8-206ENST00000588554 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
GPATCH8-206ENST00000588554 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
GPATCH8-206ENST00000588554 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
GPATCH8-206ENST00000588554 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
GPATCH8-206ENST00000588554 CCDC179H3BU77 68 aa2.38□□□□□ -2.03
GPATCH8-206ENST00000588554 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
GPATCH8-206ENST00000588554 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
GPATCH8-206ENST00000588554 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
GPATCH8-206ENST00000588554 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
GPATCH8-206ENST00000588554 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
GPATCH8-206ENST00000588554 UQCR11O14957 56 aa2.31□□□□□ -2.04
GPATCH8-206ENST00000588554 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
GPATCH8-206ENST00000588554 MIR22HGQ0VDD5 57 aa2.27□□□□□ -2.05
GPATCH8-206ENST00000588554 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
GPATCH8-206ENST00000588554 MT1AP04731 61 aa2.25□□□□□ -2.05
GPATCH8-206ENST00000588554 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
GPATCH8-206ENST00000588554 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
GPATCH8-206ENST00000588554 K7ERS5 55 aa2.2□□□□□ -2.06
GPATCH8-206ENST00000588554 PSPHP1O15172 72 aa2.2□□□□□ -2.06
GPATCH8-206ENST00000588554 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
GPATCH8-206ENST00000588554 TMEM258P61165 79 aa2.19□□□□□ -2.06
GPATCH8-206ENST00000588554 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
GPATCH8-206ENST00000588554 Q1T7F1 81 aa2.13□□□□□ -2.07
GPATCH8-206ENST00000588554 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
GPATCH8-206ENST00000588554 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
GPATCH8-206ENST00000588554 A6NED7 52 aa2.08□□□□□ -2.08
GPATCH8-206ENST00000588554 RPS28P62857 69 aaKnown RBP2.08□□□□□ -2.08
GPATCH8-206ENST00000588554 ROMO1P60602 79 aa2.07□□□□□ -2.08
GPATCH8-206ENST00000588554 V9GYY9 64 aa2.07□□□□□ -2.08
GPATCH8-206ENST00000588554 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
GPATCH8-206ENST00000588554 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
GPATCH8-206ENST00000588554 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
GPATCH8-206ENST00000588554 PMAIP1Q13794 54 aa1.52□□□□□ -2.17
GPATCH8-206ENST00000588554 LUZP6Q538Z0 58 aa1.23□□□□□ -2.21
GPATCH8-206ENST00000588554 PRO0628Q9UI54 55 aa1.23□□□□□ -2.21
GPATCH8-206ENST00000588554 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
GPATCH8-206ENST00000588554 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
GPATCH8-206ENST00000588554 PRM1P04553 51 aa1.08□□□□□ -2.24
GPATCH8-206ENST00000588554 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
GPATCH8-206ENST00000588554 INE1O15225 51 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 100.8 ms