RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
TPGS1-202ENST00000588278 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
TPGS1-202ENST00000588278 MT1EP04732 61 aa5.26□□□□□ -1.57
TPGS1-202ENST00000588278 MT1LQ93083 61 aa5.26□□□□□ -1.57
TPGS1-202ENST00000588278 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
TPGS1-202ENST00000588278 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
TPGS1-202ENST00000588278 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
TPGS1-202ENST00000588278 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
TPGS1-202ENST00000588278 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
TPGS1-202ENST00000588278 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
TPGS1-202ENST00000588278 MT1GP13640 62 aa5.08□□□□□ -1.6
TPGS1-202ENST00000588278 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
TPGS1-202ENST00000588278 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
TPGS1-202ENST00000588278 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
TPGS1-202ENST00000588278 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
TPGS1-202ENST00000588278 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
TPGS1-202ENST00000588278 MT1MQ8N339 61 aa4.94□□□□□ -1.62
TPGS1-202ENST00000588278 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
TPGS1-202ENST00000588278 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
TPGS1-202ENST00000588278 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
TPGS1-202ENST00000588278 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
TPGS1-202ENST00000588278 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
TPGS1-202ENST00000588278 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
TPGS1-202ENST00000588278 PRM1P04553 51 aa4.56□□□□□ -1.68
TPGS1-202ENST00000588278 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
TPGS1-202ENST00000588278 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
TPGS1-202ENST00000588278 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
TPGS1-202ENST00000588278 SPRR2EP22531 72 aa4.48□□□□□ -1.69
TPGS1-202ENST00000588278 SPRR2BP35325 72 aa4.48□□□□□ -1.69
TPGS1-202ENST00000588278 SPRR2AP35326 72 aa4.48□□□□□ -1.69
TPGS1-202ENST00000588278 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
TPGS1-202ENST00000588278 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
TPGS1-202ENST00000588278 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
TPGS1-202ENST00000588278 MT1AP04731 61 aa4.36□□□□□ -1.71
TPGS1-202ENST00000588278 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
TPGS1-202ENST00000588278 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
TPGS1-202ENST00000588278 SPRR2DP22532 72 aa4.28□□□□□ -1.72
TPGS1-202ENST00000588278 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
TPGS1-202ENST00000588278 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
TPGS1-202ENST00000588278 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
TPGS1-202ENST00000588278 NEBP20929 6669 aa4.17□□□□□ -1.74
TPGS1-202ENST00000588278 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
TPGS1-202ENST00000588278 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
TPGS1-202ENST00000588278 MT4P47944 62 aa3.98□□□□□ -1.77
TPGS1-202ENST00000588278 MT3P25713 68 aa3.97□□□□□ -1.77
TPGS1-202ENST00000588278 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
TPGS1-202ENST00000588278 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
TPGS1-202ENST00000588278 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
TPGS1-202ENST00000588278 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
TPGS1-202ENST00000588278 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
TPGS1-202ENST00000588278 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
TPGS1-202ENST00000588278 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
TPGS1-202ENST00000588278 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
TPGS1-202ENST00000588278 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
TPGS1-202ENST00000588278 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
TPGS1-202ENST00000588278 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
TPGS1-202ENST00000588278 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
TPGS1-202ENST00000588278 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
TPGS1-202ENST00000588278 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
TPGS1-202ENST00000588278 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
TPGS1-202ENST00000588278 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
TPGS1-202ENST00000588278 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
TPGS1-202ENST00000588278 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
TPGS1-202ENST00000588278 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
TPGS1-202ENST00000588278 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
TPGS1-202ENST00000588278 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
TPGS1-202ENST00000588278 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
TPGS1-202ENST00000588278 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
TPGS1-202ENST00000588278 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
TPGS1-202ENST00000588278 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
TPGS1-202ENST00000588278 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
TPGS1-202ENST00000588278 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
TPGS1-202ENST00000588278 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
TPGS1-202ENST00000588278 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TPGS1-202ENST00000588278 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TPGS1-202ENST00000588278 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
TPGS1-202ENST00000588278 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
TPGS1-202ENST00000588278 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 84.6 ms