RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
GRN-210ENST00000587958 V9GYY9 64 aa5.24□□□□□ -1.57
GRN-210ENST00000587958 PSPHP1O15172 72 aa5.23□□□□□ -1.57
GRN-210ENST00000587958 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
GRN-210ENST00000587958 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
GRN-210ENST00000587958 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
GRN-210ENST00000587958 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
GRN-210ENST00000587958 Q1T7F1 81 aa5.18□□□□□ -1.58
GRN-210ENST00000587958 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
GRN-210ENST00000587958 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
GRN-210ENST00000587958 MT4P47944 62 aa5.1□□□□□ -1.59
GRN-210ENST00000587958 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
GRN-210ENST00000587958 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
GRN-210ENST00000587958 K7ERS5 55 aa5□□□□□ -1.61
GRN-210ENST00000587958 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
GRN-210ENST00000587958 A6NED7 52 aa4.98□□□□□ -1.61
GRN-210ENST00000587958 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
GRN-210ENST00000587958 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
GRN-210ENST00000587958 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
GRN-210ENST00000587958 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
GRN-210ENST00000587958 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
GRN-210ENST00000587958 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
GRN-210ENST00000587958 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
GRN-210ENST00000587958 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
GRN-210ENST00000587958 ROMO1P60602 79 aa4.77□□□□□ -1.65
GRN-210ENST00000587958 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
GRN-210ENST00000587958 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
GRN-210ENST00000587958 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
GRN-210ENST00000587958 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
GRN-210ENST00000587958 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
GRN-210ENST00000587958 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
GRN-210ENST00000587958 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
GRN-210ENST00000587958 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
GRN-210ENST00000587958 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
GRN-210ENST00000587958 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
GRN-210ENST00000587958 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
GRN-210ENST00000587958 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
GRN-210ENST00000587958 MT1AP04731 61 aa4.51□□□□□ -1.69
GRN-210ENST00000587958 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
GRN-210ENST00000587958 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
GRN-210ENST00000587958 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
GRN-210ENST00000587958 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
GRN-210ENST00000587958 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
GRN-210ENST00000587958 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
GRN-210ENST00000587958 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
GRN-210ENST00000587958 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
GRN-210ENST00000587958 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
GRN-210ENST00000587958 MT3P25713 68 aa4.08□□□□□ -1.76
GRN-210ENST00000587958 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
GRN-210ENST00000587958 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
GRN-210ENST00000587958 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
GRN-210ENST00000587958 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
GRN-210ENST00000587958 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
GRN-210ENST00000587958 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
GRN-210ENST00000587958 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
GRN-210ENST00000587958 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
GRN-210ENST00000587958 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
GRN-210ENST00000587958 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
GRN-210ENST00000587958 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
GRN-210ENST00000587958 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
GRN-210ENST00000587958 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
GRN-210ENST00000587958 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
GRN-210ENST00000587958 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
GRN-210ENST00000587958 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
GRN-210ENST00000587958 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
GRN-210ENST00000587958 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
GRN-210ENST00000587958 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
GRN-210ENST00000587958 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
GRN-210ENST00000587958 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
GRN-210ENST00000587958 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
GRN-210ENST00000587958 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
GRN-210ENST00000587958 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
GRN-210ENST00000587958 INE1O15225 51 aa2.59□□□□□ -1.99
GRN-210ENST00000587958 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
GRN-210ENST00000587958 PRM1P04553 51 aa2.5□□□□□ -2.01
GRN-210ENST00000587958 H3BS24 57 aa2.31□□□□□ -2.04
GRN-210ENST00000587958 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
GRN-210ENST00000587958 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 19.4 ms