RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
NFIX-209ENST00000587760 NDUFAF8A1L188 74 aa5.96□□□□□ -1.45
NFIX-209ENST00000587760 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.45
NFIX-209ENST00000587760 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
NFIX-209ENST00000587760 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
NFIX-209ENST00000587760 MT1GP13640 62 aa5.87□□□□□ -1.47
NFIX-209ENST00000587760 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
NFIX-209ENST00000587760 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
NFIX-209ENST00000587760 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
NFIX-209ENST00000587760 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
NFIX-209ENST00000587760 MT1MQ8N339 61 aa5.75□□□□□ -1.49
NFIX-209ENST00000587760 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
NFIX-209ENST00000587760 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
NFIX-209ENST00000587760 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
NFIX-209ENST00000587760 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
NFIX-209ENST00000587760 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
NFIX-209ENST00000587760 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
NFIX-209ENST00000587760 NEBP20929 6669 aa5.6□□□□□ -1.51
NFIX-209ENST00000587760 SPRR2EP22531 72 aa5.59□□□□□ -1.51
NFIX-209ENST00000587760 SPRR2BP35325 72 aa5.59□□□□□ -1.51
NFIX-209ENST00000587760 SPRR2AP35326 72 aa5.59□□□□□ -1.51
NFIX-209ENST00000587760 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
NFIX-209ENST00000587760 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
NFIX-209ENST00000587760 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
NFIX-209ENST00000587760 H3BS24 57 aa5.42□□□□□ -1.54
NFIX-209ENST00000587760 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
NFIX-209ENST00000587760 SPRR2DP22532 72 aa5.39□□□□□ -1.55
NFIX-209ENST00000587760 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
NFIX-209ENST00000587760 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
NFIX-209ENST00000587760 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
NFIX-209ENST00000587760 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
NFIX-209ENST00000587760 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
NFIX-209ENST00000587760 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
NFIX-209ENST00000587760 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
NFIX-209ENST00000587760 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
NFIX-209ENST00000587760 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
NFIX-209ENST00000587760 MT1AP04731 61 aa5.14□□□□□ -1.59
NFIX-209ENST00000587760 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
NFIX-209ENST00000587760 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
NFIX-209ENST00000587760 INE1O15225 51 aa5.04□□□□□ -1.6
NFIX-209ENST00000587760 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
NFIX-209ENST00000587760 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
NFIX-209ENST00000587760 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.62
NFIX-209ENST00000587760 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
NFIX-209ENST00000587760 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
NFIX-209ENST00000587760 MT3P25713 68 aa4.69□□□□□ -1.66
NFIX-209ENST00000587760 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
NFIX-209ENST00000587760 MT4P47944 62 aa4.62□□□□□ -1.67
NFIX-209ENST00000587760 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
NFIX-209ENST00000587760 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
NFIX-209ENST00000587760 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
NFIX-209ENST00000587760 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
NFIX-209ENST00000587760 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
NFIX-209ENST00000587760 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
NFIX-209ENST00000587760 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
NFIX-209ENST00000587760 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
NFIX-209ENST00000587760 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
NFIX-209ENST00000587760 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
NFIX-209ENST00000587760 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
NFIX-209ENST00000587760 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
NFIX-209ENST00000587760 PRM1P04553 51 aa3.9□□□□□ -1.79
NFIX-209ENST00000587760 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
NFIX-209ENST00000587760 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
NFIX-209ENST00000587760 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
NFIX-209ENST00000587760 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
NFIX-209ENST00000587760 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
NFIX-209ENST00000587760 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NFIX-209ENST00000587760 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
NFIX-209ENST00000587760 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
NFIX-209ENST00000587760 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
NFIX-209ENST00000587760 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
NFIX-209ENST00000587760 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NFIX-209ENST00000587760 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
NFIX-209ENST00000587760 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
NFIX-209ENST00000587760 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
NFIX-209ENST00000587760 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
NFIX-209ENST00000587760 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 83.2 ms