RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
CIRBP-212ENST00000587169 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
CIRBP-212ENST00000587169 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
CIRBP-212ENST00000587169 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
CIRBP-212ENST00000587169 MT1EP04732 61 aa5.74□□□□□ -1.49
CIRBP-212ENST00000587169 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
CIRBP-212ENST00000587169 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
CIRBP-212ENST00000587169 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
CIRBP-212ENST00000587169 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
CIRBP-212ENST00000587169 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
CIRBP-212ENST00000587169 MT1GP13640 62 aa5.51□□□□□ -1.53
CIRBP-212ENST00000587169 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
CIRBP-212ENST00000587169 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
CIRBP-212ENST00000587169 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
CIRBP-212ENST00000587169 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
CIRBP-212ENST00000587169 MT1MQ8N339 61 aa5.36□□□□□ -1.55
CIRBP-212ENST00000587169 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
CIRBP-212ENST00000587169 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
CIRBP-212ENST00000587169 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
CIRBP-212ENST00000587169 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
CIRBP-212ENST00000587169 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
CIRBP-212ENST00000587169 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
CIRBP-212ENST00000587169 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
CIRBP-212ENST00000587169 SPRR2EP22531 72 aa4.91□□□□□ -1.62
CIRBP-212ENST00000587169 SPRR2BP35325 72 aa4.91□□□□□ -1.62
CIRBP-212ENST00000587169 SPRR2AP35326 72 aa4.91□□□□□ -1.62
CIRBP-212ENST00000587169 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CIRBP-212ENST00000587169 MT1AP04731 61 aa4.8□□□□□ -1.64
CIRBP-212ENST00000587169 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CIRBP-212ENST00000587169 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
CIRBP-212ENST00000587169 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
CIRBP-212ENST00000587169 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
CIRBP-212ENST00000587169 PRM1P04553 51 aa4.67□□□□□ -1.66
CIRBP-212ENST00000587169 SPRR2DP22532 72 aa4.66□□□□□ -1.66
CIRBP-212ENST00000587169 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
CIRBP-212ENST00000587169 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
CIRBP-212ENST00000587169 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
CIRBP-212ENST00000587169 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CIRBP-212ENST00000587169 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
CIRBP-212ENST00000587169 MT4P47944 62 aa4.38□□□□□ -1.71
CIRBP-212ENST00000587169 NEBP20929 6669 aa4.34□□□□□ -1.71
CIRBP-212ENST00000587169 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
CIRBP-212ENST00000587169 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
CIRBP-212ENST00000587169 MT3P25713 68 aa4.29□□□□□ -1.72
CIRBP-212ENST00000587169 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CIRBP-212ENST00000587169 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
CIRBP-212ENST00000587169 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
CIRBP-212ENST00000587169 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
CIRBP-212ENST00000587169 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
CIRBP-212ENST00000587169 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CIRBP-212ENST00000587169 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
CIRBP-212ENST00000587169 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
CIRBP-212ENST00000587169 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
CIRBP-212ENST00000587169 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CIRBP-212ENST00000587169 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
CIRBP-212ENST00000587169 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
CIRBP-212ENST00000587169 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
CIRBP-212ENST00000587169 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
CIRBP-212ENST00000587169 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
CIRBP-212ENST00000587169 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
CIRBP-212ENST00000587169 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
CIRBP-212ENST00000587169 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
CIRBP-212ENST00000587169 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CIRBP-212ENST00000587169 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CIRBP-212ENST00000587169 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CIRBP-212ENST00000587169 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CIRBP-212ENST00000587169 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CIRBP-212ENST00000587169 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.9
CIRBP-212ENST00000587169 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
CIRBP-212ENST00000587169 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
CIRBP-212ENST00000587169 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
CIRBP-212ENST00000587169 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
CIRBP-212ENST00000587169 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
CIRBP-212ENST00000587169 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
CIRBP-212ENST00000587169 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
CIRBP-212ENST00000587169 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CIRBP-212ENST00000587169 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CIRBP-212ENST00000587169 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 197.1 ms