RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 KRTAP4-9Q9BYQ8 210 aa7.43□□□□□ -1.22
CIRBP-209ENST00000586555 K7ERS5 55 aa7.42□□□□□ -1.22
CIRBP-209ENST00000586555 Q1T7F1 81 aa7.4□□□□□ -1.22
CIRBP-209ENST00000586555 PSPHP1O15172 72 aa7.38□□□□□ -1.23
CIRBP-209ENST00000586555 MT1LQ93083 61 aa7.33□□□□□ -1.24
CIRBP-209ENST00000586555 MT1MQ8N339 61 aa7.27□□□□□ -1.25
CIRBP-209ENST00000586555 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
CIRBP-209ENST00000586555 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
CIRBP-209ENST00000586555 KRTAP12-3P60328 96 aa7.21□□□□□ -1.26
CIRBP-209ENST00000586555 LCE4AQ5TA78 99 aa7.19□□□□□ -1.26
CIRBP-209ENST00000586555 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
CIRBP-209ENST00000586555 A6NED7 52 aa7.18□□□□□ -1.26
CIRBP-209ENST00000586555 PCP4P48539 62 aa7.16□□□□□ -1.26
CIRBP-209ENST00000586555 RPS28P62857 69 aaKnown RBP7.12□□□□□ -1.27
CIRBP-209ENST00000586555 MT4P47944 62 aa7.1□□□□□ -1.27
CIRBP-209ENST00000586555 KRTAP5-4Q6L8H1 288 aa7.05□□□□□ -1.28
CIRBP-209ENST00000586555 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
CIRBP-209ENST00000586555 AHNAK2Q8IVF2 5795 aa7.04□□□□□ -1.28
CIRBP-209ENST00000586555 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
CIRBP-209ENST00000586555 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
CIRBP-209ENST00000586555 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
CIRBP-209ENST00000586555 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
CIRBP-209ENST00000586555 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
CIRBP-209ENST00000586555 KRTAP5-10Q6L8G5 202 aa6.87□□□□□ -1.31
CIRBP-209ENST00000586555 ROMO1P60602 79 aa6.85□□□□□ -1.31
CIRBP-209ENST00000586555 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
CIRBP-209ENST00000586555 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
CIRBP-209ENST00000586555 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
CIRBP-209ENST00000586555 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
CIRBP-209ENST00000586555 KRTAP5-7Q6L8G8 165 aa6.64□□□□□ -1.35
CIRBP-209ENST00000586555 KRTAP20-2Q3LI61 65 aa6.63□□□□□ -1.35
CIRBP-209ENST00000586555 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
CIRBP-209ENST00000586555 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
CIRBP-209ENST00000586555 SYNE1Q8NF91 8797 aaKnown RBP6.54□□□□□ -1.36
CIRBP-209ENST00000586555 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
CIRBP-209ENST00000586555 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
CIRBP-209ENST00000586555 MT1AP04731 61 aa6.26□□□□□ -1.41
CIRBP-209ENST00000586555 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
CIRBP-209ENST00000586555 KRTAP6-1Q3LI64 71 aa6.18□□□□□ -1.42
CIRBP-209ENST00000586555 KRTAP5-2Q701N4 177 aa6.14□□□□□ -1.43
CIRBP-209ENST00000586555 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
CIRBP-209ENST00000586555 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
CIRBP-209ENST00000586555 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
CIRBP-209ENST00000586555 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
CIRBP-209ENST00000586555 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
CIRBP-209ENST00000586555 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
CIRBP-209ENST00000586555 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
CIRBP-209ENST00000586555 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
CIRBP-209ENST00000586555 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
CIRBP-209ENST00000586555 MT3P25713 68 aa5.76□□□□□ -1.49
CIRBP-209ENST00000586555 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
CIRBP-209ENST00000586555 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
CIRBP-209ENST00000586555 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
CIRBP-209ENST00000586555 KRTAP5-1Q6L8H4 278 aa5.54□□□□□ -1.52
CIRBP-209ENST00000586555 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
CIRBP-209ENST00000586555 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
CIRBP-209ENST00000586555 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
CIRBP-209ENST00000586555 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
CIRBP-209ENST00000586555 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
CIRBP-209ENST00000586555 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
CIRBP-209ENST00000586555 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
CIRBP-209ENST00000586555 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
CIRBP-209ENST00000586555 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
CIRBP-209ENST00000586555 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
CIRBP-209ENST00000586555 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
CIRBP-209ENST00000586555 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
CIRBP-209ENST00000586555 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
CIRBP-209ENST00000586555 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CIRBP-209ENST00000586555 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
CIRBP-209ENST00000586555 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
CIRBP-209ENST00000586555 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
CIRBP-209ENST00000586555 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
CIRBP-209ENST00000586555 PRM1P04553 51 aa3.47□□□□□ -1.85
CIRBP-209ENST00000586555 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CIRBP-209ENST00000586555 INE1O15225 51 aa3.27□□□□□ -1.89
CIRBP-209ENST00000586555 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CIRBP-209ENST00000586555 H3BS24 57 aa2.8□□□□□ -1.96
CIRBP-209ENST00000586555 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms