RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 MT1GP13640 62 aa10.22□□□□□ -0.77
H3F3B-203ENST00000586518 KRTAP4-7Q9BYR0 210 aa10.2□□□□□ -0.78
H3F3B-203ENST00000586518 MT1MQ8N339 61 aa10.05□□□□□ -0.8
H3F3B-203ENST00000586518 MACF1Q9UPN3 7388 aaKnown RBP10.02□□□□□ -0.8
H3F3B-203ENST00000586518 KRTAP9-6A8MVA2 160 aa9.99□□□□□ -0.81
H3F3B-203ENST00000586518 KRTAP5-9P26371 169 aa9.98□□□□□ -0.81
H3F3B-203ENST00000586518 LCE5AQ5TCM9 118 aa9.98□□□□□ -0.81
H3F3B-203ENST00000586518 MUC12Q9UKN1 5478 aa9.88□□□□□ -0.83
H3F3B-203ENST00000586518 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
H3F3B-203ENST00000586518 A0A0A0MQY5 61 aa9.86□□□□□ -0.83
H3F3B-203ENST00000586518 KRTAP4-3Q9BYR4 195 aa9.82□□□□□ -0.84
H3F3B-203ENST00000586518 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.73□□□□□ -0.85
H3F3B-203ENST00000586518 LCE1AQ5T7P2 110 aa9.72□□□□□ -0.85
H3F3B-203ENST00000586518 KRTAP6-3Q3LI67 103 aa9.69□□□□□ -0.86
H3F3B-203ENST00000586518 SPRR2EP22531 72 aa9.66□□□□□ -0.86
H3F3B-203ENST00000586518 SPRR2BP35325 72 aa9.66□□□□□ -0.86
H3F3B-203ENST00000586518 SPRR2AP35326 72 aa9.66□□□□□ -0.86
H3F3B-203ENST00000586518 SYNE2Q8WXH0 6885 aaKnown RBP9.63□□□□□ -0.87
H3F3B-203ENST00000586518 LOC100996750A0A140TA64 210 aa9.56□□□□□ -0.88
H3F3B-203ENST00000586518 KRTAP2-3P0C7H8 128 aa9.48□□□□□ -0.89
H3F3B-203ENST00000586518 KRTAP2-4Q9BYR9 128 aa9.48□□□□□ -0.89
H3F3B-203ENST00000586518 KRTAP2-1Q9BYU5 128 aa9.48□□□□□ -0.89
H3F3B-203ENST00000586518 MDN1Q9NU22 5596 aa9.36□□□□□ -0.91
H3F3B-203ENST00000586518 SPRR2DP22532 72 aa9.31□□□□□ -0.92
H3F3B-203ENST00000586518 INE1O15225 51 aa9.14□□□□□ -0.95
H3F3B-203ENST00000586518 DSTQ03001 7570 aaKnown RBP9.09□□□□□ -0.95
H3F3B-203ENST00000586518 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
H3F3B-203ENST00000586518 MT1AP04731 61 aa8.99□□□□□ -0.97
H3F3B-203ENST00000586518 KRTAP5-5Q701N2 237 aaPredicted RBP8.97□□□□□ -0.97
H3F3B-203ENST00000586518 LCE3BQ5TA77 95 aa8.9□□□□□ -0.98
H3F3B-203ENST00000586518 KRTAP6-1Q3LI64 71 aa8.85□□□□□ -0.99
H3F3B-203ENST00000586518 NEBP20929 6669 aa8.68□□□□□ -1.02
H3F3B-203ENST00000586518 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
H3F3B-203ENST00000586518 KRTAP5-4Q6L8H1 288 aa8.42□□□□□ -1.06
H3F3B-203ENST00000586518 KRTAP12-4P60329 112 aa8.4□□□□□ -1.07
H3F3B-203ENST00000586518 SYNE1Q8NF91 8797 aaKnown RBP8.34□□□□□ -1.07
H3F3B-203ENST00000586518 LCE4AQ5TA78 99 aa8.29□□□□□ -1.08
H3F3B-203ENST00000586518 KRTAP2-2Q9BYT5 123 aa8.28□□□□□ -1.08
H3F3B-203ENST00000586518 KRTAP4-9Q9BYQ8 210 aa8.22□□□□□ -1.09
H3F3B-203ENST00000586518 MT3P25713 68 aa8.18□□□□□ -1.1
H3F3B-203ENST00000586518 KRTAP20-1Q3LI63 56 aa8.15□□□□□ -1.11
H3F3B-203ENST00000586518 KRTAP6-2Q3LI66 62 aa8.12□□□□□ -1.11
H3F3B-203ENST00000586518 LCE3DQ9BYE3 92 aa8.12□□□□□ -1.11
H3F3B-203ENST00000586518 MT4P47944 62 aa8.03□□□□□ -1.12
H3F3B-203ENST00000586518 KRTAP4-6Q9BYQ5 205 aa7.96□□□□□ -1.14
H3F3B-203ENST00000586518 LCE3EQ5T5B0 92 aa7.95□□□□□ -1.14
H3F3B-203ENST00000586518 KRTAP20-2Q3LI61 65 aa7.88□□□□□ -1.15
H3F3B-203ENST00000586518 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
H3F3B-203ENST00000586518 KRTAP5-2Q701N4 177 aa7.69□□□□□ -1.18
H3F3B-203ENST00000586518 HMCN1Q96RW7 5635 aa7.55□□□□□ -1.2
H3F3B-203ENST00000586518 KRTAP5-3Q6L8H2 238 aa7.54□□□□□ -1.2
H3F3B-203ENST00000586518 OBSCNQ5VST9 7968 aa7.17□□□□□ -1.26
H3F3B-203ENST00000586518 PRM1P04553 51 aa7.06□□□□□ -1.28
H3F3B-203ENST00000586518 LCE1EQ5T753 118 aa6.98□□□□□ -1.29
H3F3B-203ENST00000586518 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
H3F3B-203ENST00000586518 LCE1BQ5T7P3 118 aa6.58□□□□□ -1.36
H3F3B-203ENST00000586518 KRTAP5-1Q6L8H4 278 aa6.58□□□□□ -1.36
H3F3B-203ENST00000586518 KRTAP5-10Q6L8G5 202 aa6.52□□□□□ -1.37
H3F3B-203ENST00000586518 LCE1CQ5T751 118 aa6.5□□□□□ -1.37
H3F3B-203ENST00000586518 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
H3F3B-203ENST00000586518 KRTAP5-8O75690 187 aa6.45□□□□□ -1.38
H3F3B-203ENST00000586518 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
H3F3B-203ENST00000586518 MUC5ACP98088 5654 aa6.41□□□□□ -1.38
H3F3B-203ENST00000586518 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
H3F3B-203ENST00000586518 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
H3F3B-203ENST00000586518 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.09□□□□□ -1.43
H3F3B-203ENST00000586518 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
H3F3B-203ENST00000586518 KRTAP21-2Q3LI59 83 aa5.77□□□□□ -1.49
H3F3B-203ENST00000586518 KRTAP5-11Q6L8G4 156 aa5.68□□□□□ -1.5
H3F3B-203ENST00000586518 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
H3F3B-203ENST00000586518 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
H3F3B-203ENST00000586518 KRTAP4-4Q9BYR3 166 aa5.11□□□□□ -1.59
H3F3B-203ENST00000586518 LCE1FQ5T754 118 aa5.09□□□□□ -1.6
H3F3B-203ENST00000586518 AHNAKQ09666 5890 aaKnown RBP4.96□□□□□ -1.62
H3F3B-203ENST00000586518 PHGR1C9JFL3 82 aa4.86□□□□□ -1.63
H3F3B-203ENST00000586518 KRTAP21-1Q3LI58 79 aa4.36□□□□□ -1.71
H3F3B-203ENST00000586518 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
H3F3B-203ENST00000586518 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms