RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
TRIM47-203ENST00000586495 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
TRIM47-203ENST00000586495 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
TRIM47-203ENST00000586495 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
TRIM47-203ENST00000586495 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
TRIM47-203ENST00000586495 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
TRIM47-203ENST00000586495 UQCR11O14957 56 aa5.77□□□□□ -1.49
TRIM47-203ENST00000586495 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
TRIM47-203ENST00000586495 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
TRIM47-203ENST00000586495 TMEM258P61165 79 aa5.69□□□□□ -1.5
TRIM47-203ENST00000586495 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
TRIM47-203ENST00000586495 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
TRIM47-203ENST00000586495 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
TRIM47-203ENST00000586495 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
TRIM47-203ENST00000586495 K7ERS5 55 aa5.58□□□□□ -1.52
TRIM47-203ENST00000586495 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
TRIM47-203ENST00000586495 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
TRIM47-203ENST00000586495 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
TRIM47-203ENST00000586495 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
TRIM47-203ENST00000586495 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
TRIM47-203ENST00000586495 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
TRIM47-203ENST00000586495 V9GYY9 64 aa5.46□□□□□ -1.54
TRIM47-203ENST00000586495 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
TRIM47-203ENST00000586495 PSPHP1O15172 72 aa5.41□□□□□ -1.54
TRIM47-203ENST00000586495 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
TRIM47-203ENST00000586495 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
TRIM47-203ENST00000586495 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
TRIM47-203ENST00000586495 Q1T7F1 81 aa5.37□□□□□ -1.55
TRIM47-203ENST00000586495 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
TRIM47-203ENST00000586495 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
TRIM47-203ENST00000586495 A6NED7 52 aa5.24□□□□□ -1.57
TRIM47-203ENST00000586495 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
TRIM47-203ENST00000586495 MT1AP04731 61 aa5.14□□□□□ -1.59
TRIM47-203ENST00000586495 ROMO1P60602 79 aa5.13□□□□□ -1.59
TRIM47-203ENST00000586495 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
TRIM47-203ENST00000586495 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
TRIM47-203ENST00000586495 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
TRIM47-203ENST00000586495 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
TRIM47-203ENST00000586495 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
TRIM47-203ENST00000586495 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
TRIM47-203ENST00000586495 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
TRIM47-203ENST00000586495 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
TRIM47-203ENST00000586495 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
TRIM47-203ENST00000586495 MT3P25713 68 aa4.73□□□□□ -1.65
TRIM47-203ENST00000586495 PCP4P48539 62 aa4.7□□□□□ -1.66
TRIM47-203ENST00000586495 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
TRIM47-203ENST00000586495 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
TRIM47-203ENST00000586495 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
TRIM47-203ENST00000586495 MUC5ACP98088 5654 aa4.65□□□□□ -1.66
TRIM47-203ENST00000586495 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
TRIM47-203ENST00000586495 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
TRIM47-203ENST00000586495 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
TRIM47-203ENST00000586495 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
TRIM47-203ENST00000586495 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
TRIM47-203ENST00000586495 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
TRIM47-203ENST00000586495 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
TRIM47-203ENST00000586495 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
TRIM47-203ENST00000586495 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
TRIM47-203ENST00000586495 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
TRIM47-203ENST00000586495 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
TRIM47-203ENST00000586495 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
TRIM47-203ENST00000586495 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
TRIM47-203ENST00000586495 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
TRIM47-203ENST00000586495 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TRIM47-203ENST00000586495 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
TRIM47-203ENST00000586495 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
TRIM47-203ENST00000586495 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
TRIM47-203ENST00000586495 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
TRIM47-203ENST00000586495 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
TRIM47-203ENST00000586495 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
TRIM47-203ENST00000586495 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
TRIM47-203ENST00000586495 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
TRIM47-203ENST00000586495 PRM1P04553 51 aa2.59□□□□□ -1.99
TRIM47-203ENST00000586495 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
TRIM47-203ENST00000586495 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
TRIM47-203ENST00000586495 H3BS24 57 aa2.32□□□□□ -2.04
TRIM47-203ENST00000586495 INE1O15225 51 aa2.32□□□□□ -2.04
TRIM47-203ENST00000586495 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 205.7 ms