RNA–Protein interactions for RNA: ENST00000585534.1

CNTNAP1-202, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-202ENST00000585534 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
CNTNAP1-202ENST00000585534 A8MU10 97 aa4.16□□□□□ -1.74
CNTNAP1-202ENST00000585534 MT1MQ8N339 61 aa4.16□□□□□ -1.74
CNTNAP1-202ENST00000585534 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
CNTNAP1-202ENST00000585534 MT1LQ93083 61 aa4.14□□□□□ -1.75
CNTNAP1-202ENST00000585534 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CNTNAP1-202ENST00000585534 TNP1P09430 55 aa4.12□□□□□ -1.75
CNTNAP1-202ENST00000585534 MT4P47944 62 aa4.12□□□□□ -1.75
CNTNAP1-202ENST00000585534 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
CNTNAP1-202ENST00000585534 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
CNTNAP1-202ENST00000585534 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
CNTNAP1-202ENST00000585534 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CNTNAP1-202ENST00000585534 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
CNTNAP1-202ENST00000585534 PSPHP1O15172 72 aa4.08□□□□□ -1.76
CNTNAP1-202ENST00000585534 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
CNTNAP1-202ENST00000585534 ANAPC13Q9BS18 74 aa4.05□□□□□ -1.76
CNTNAP1-202ENST00000585534 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
CNTNAP1-202ENST00000585534 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CNTNAP1-202ENST00000585534 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
CNTNAP1-202ENST00000585534 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
CNTNAP1-202ENST00000585534 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
CNTNAP1-202ENST00000585534 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
CNTNAP1-202ENST00000585534 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
CNTNAP1-202ENST00000585534 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
CNTNAP1-202ENST00000585534 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
CNTNAP1-202ENST00000585534 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
CNTNAP1-202ENST00000585534 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
CNTNAP1-202ENST00000585534 UQCR11O14957 56 aa3.89□□□□□ -1.79
CNTNAP1-202ENST00000585534 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
CNTNAP1-202ENST00000585534 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
CNTNAP1-202ENST00000585534 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
CNTNAP1-202ENST00000585534 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
CNTNAP1-202ENST00000585534 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
CNTNAP1-202ENST00000585534 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CNTNAP1-202ENST00000585534 TMEM258P61165 79 aa3.79□□□□□ -1.8
CNTNAP1-202ENST00000585534 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
CNTNAP1-202ENST00000585534 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
CNTNAP1-202ENST00000585534 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
CNTNAP1-202ENST00000585534 K7ERS5 55 aa3.76□□□□□ -1.81
CNTNAP1-202ENST00000585534 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
CNTNAP1-202ENST00000585534 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
CNTNAP1-202ENST00000585534 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
CNTNAP1-202ENST00000585534 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
CNTNAP1-202ENST00000585534 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
CNTNAP1-202ENST00000585534 MT3P25713 68 aa3.64□□□□□ -1.83
CNTNAP1-202ENST00000585534 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
CNTNAP1-202ENST00000585534 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
CNTNAP1-202ENST00000585534 Q1T7F1 81 aa3.59□□□□□ -1.83
CNTNAP1-202ENST00000585534 A6NED7 52 aa3.58□□□□□ -1.84
CNTNAP1-202ENST00000585534 MT1AP04731 61 aa3.53□□□□□ -1.84
CNTNAP1-202ENST00000585534 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
CNTNAP1-202ENST00000585534 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
CNTNAP1-202ENST00000585534 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CNTNAP1-202ENST00000585534 ROMO1P60602 79 aa3.46□□□□□ -1.86
CNTNAP1-202ENST00000585534 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CNTNAP1-202ENST00000585534 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
CNTNAP1-202ENST00000585534 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
CNTNAP1-202ENST00000585534 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
CNTNAP1-202ENST00000585534 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
CNTNAP1-202ENST00000585534 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
CNTNAP1-202ENST00000585534 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CNTNAP1-202ENST00000585534 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
CNTNAP1-202ENST00000585534 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CNTNAP1-202ENST00000585534 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CNTNAP1-202ENST00000585534 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CNTNAP1-202ENST00000585534 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
CNTNAP1-202ENST00000585534 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CNTNAP1-202ENST00000585534 INE1O15225 51 aa2.75□□□□□ -1.97
CNTNAP1-202ENST00000585534 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CNTNAP1-202ENST00000585534 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CNTNAP1-202ENST00000585534 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CNTNAP1-202ENST00000585534 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CNTNAP1-202ENST00000585534 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
CNTNAP1-202ENST00000585534 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
CNTNAP1-202ENST00000585534 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CNTNAP1-202ENST00000585534 PRM1P04553 51 aa1.77□□□□□ -2.13
CNTNAP1-202ENST00000585534 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CNTNAP1-202ENST00000585534 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 53.8 ms