RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 KMT2DO14686 5537 aa2.38□□□□□ -2.03
CDH8-213ENST00000584966 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
CDH8-213ENST00000584966 MT1XP80297 61 aa2.37□□□□□ -2.03
CDH8-213ENST00000584966 A6NN06 94 aa2.35□□□□□ -2.03
CDH8-213ENST00000584966 LINC01554Q52M75 96 aa2.34□□□□□ -2.03
CDH8-213ENST00000584966 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
CDH8-213ENST00000584966 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
CDH8-213ENST00000584966 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
CDH8-213ENST00000584966 A0A1B0GU33 70 aa2.32□□□□□ -2.04
CDH8-213ENST00000584966 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
CDH8-213ENST00000584966 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
CDH8-213ENST00000584966 A0A1B0GU69 56 aa2.31□□□□□ -2.04
CDH8-213ENST00000584966 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
CDH8-213ENST00000584966 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
CDH8-213ENST00000584966 A0A0D9SG42 100 aa2.27□□□□□ -2.05
CDH8-213ENST00000584966 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
CDH8-213ENST00000584966 Q1T7F1 81 aa2.26□□□□□ -2.05
CDH8-213ENST00000584966 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
CDH8-213ENST00000584966 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
CDH8-213ENST00000584966 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
CDH8-213ENST00000584966 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
CDH8-213ENST00000584966 K7ERS5 55 aa2.22□□□□□ -2.05
CDH8-213ENST00000584966 NEBP20929 6669 aa2.22□□□□□ -2.05
CDH8-213ENST00000584966 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
CDH8-213ENST00000584966 UQCR11O14957 56 aa2.21□□□□□ -2.06
CDH8-213ENST00000584966 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CDH8-213ENST00000584966 MIR22HGQ0VDD5 57 aa2.18□□□□□ -2.06
CDH8-213ENST00000584966 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
CDH8-213ENST00000584966 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
CDH8-213ENST00000584966 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
CDH8-213ENST00000584966 A6NED7 52 aa2.14□□□□□ -2.07
CDH8-213ENST00000584966 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
CDH8-213ENST00000584966 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
CDH8-213ENST00000584966 TNP1P09430 55 aa2.09□□□□□ -2.07
CDH8-213ENST00000584966 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
CDH8-213ENST00000584966 MT1EP04732 61 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 SPRR2EP22531 72 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 SPRR2BP35325 72 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 SPRR2AP35326 72 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
CDH8-213ENST00000584966 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
CDH8-213ENST00000584966 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
CDH8-213ENST00000584966 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
CDH8-213ENST00000584966 SPRR2DP22532 72 aa2.01□□□□□ -2.09
CDH8-213ENST00000584966 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
CDH8-213ENST00000584966 MT1LQ93083 61 aa2.01□□□□□ -2.09
CDH8-213ENST00000584966 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
CDH8-213ENST00000584966 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
CDH8-213ENST00000584966 ROMO1P60602 79 aa2□□□□□ -2.09
CDH8-213ENST00000584966 MT1GP13640 62 aa1.99□□□□□ -2.09
CDH8-213ENST00000584966 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
CDH8-213ENST00000584966 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
CDH8-213ENST00000584966 MT1MQ8N339 61 aa1.97□□□□□ -2.09
CDH8-213ENST00000584966 BRK1Q8WUW1 75 aa1.95□□□□□ -2.1
CDH8-213ENST00000584966 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
CDH8-213ENST00000584966 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CDH8-213ENST00000584966 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
CDH8-213ENST00000584966 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CDH8-213ENST00000584966 MT4P47944 62 aa1.75□□□□□ -2.13
CDH8-213ENST00000584966 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
CDH8-213ENST00000584966 KTN1-AS1Q86SY8 53 aa1.73□□□□□ -2.13
CDH8-213ENST00000584966 MT1AP04731 61 aa1.7□□□□□ -2.14
CDH8-213ENST00000584966 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
CDH8-213ENST00000584966 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
CDH8-213ENST00000584966 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
CDH8-213ENST00000584966 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
CDH8-213ENST00000584966 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
CDH8-213ENST00000584966 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
CDH8-213ENST00000584966 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
CDH8-213ENST00000584966 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
CDH8-213ENST00000584966 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
CDH8-213ENST00000584966 INE1O15225 51 aa1.36□□□□□ -2.19
CDH8-213ENST00000584966 PRM1P04553 51 aa1.03□□□□□ -2.24
CDH8-213ENST00000584966 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CDH8-213ENST00000584966 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CDH8-213ENST00000584966 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 54.1 ms