RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
TVP23C-210ENST00000584811 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
TVP23C-210ENST00000584811 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
TVP23C-210ENST00000584811 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
TVP23C-210ENST00000584811 MT1GP13640 62 aa5.22□□□□□ -1.57
TVP23C-210ENST00000584811 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
TVP23C-210ENST00000584811 MT1MQ8N339 61 aa5.19□□□□□ -1.58
TVP23C-210ENST00000584811 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
TVP23C-210ENST00000584811 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
TVP23C-210ENST00000584811 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
TVP23C-210ENST00000584811 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
TVP23C-210ENST00000584811 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
TVP23C-210ENST00000584811 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
TVP23C-210ENST00000584811 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
TVP23C-210ENST00000584811 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
TVP23C-210ENST00000584811 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
TVP23C-210ENST00000584811 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
TVP23C-210ENST00000584811 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
TVP23C-210ENST00000584811 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
TVP23C-210ENST00000584811 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
TVP23C-210ENST00000584811 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
TVP23C-210ENST00000584811 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
TVP23C-210ENST00000584811 SPRR2EP22531 72 aa4.73□□□□□ -1.65
TVP23C-210ENST00000584811 SPRR2BP35325 72 aa4.73□□□□□ -1.65
TVP23C-210ENST00000584811 SPRR2AP35326 72 aa4.73□□□□□ -1.65
TVP23C-210ENST00000584811 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
TVP23C-210ENST00000584811 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
TVP23C-210ENST00000584811 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.68
TVP23C-210ENST00000584811 MT1AP04731 61 aa4.57□□□□□ -1.68
TVP23C-210ENST00000584811 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
TVP23C-210ENST00000584811 SPRR2DP22532 72 aa4.51□□□□□ -1.69
TVP23C-210ENST00000584811 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
TVP23C-210ENST00000584811 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
TVP23C-210ENST00000584811 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
TVP23C-210ENST00000584811 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
TVP23C-210ENST00000584811 NEBP20929 6669 aa4.28□□□□□ -1.72
TVP23C-210ENST00000584811 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
TVP23C-210ENST00000584811 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
TVP23C-210ENST00000584811 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
TVP23C-210ENST00000584811 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
TVP23C-210ENST00000584811 MT3P25713 68 aa4.1□□□□□ -1.75
TVP23C-210ENST00000584811 MT4P47944 62 aa4.08□□□□□ -1.76
TVP23C-210ENST00000584811 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
TVP23C-210ENST00000584811 PRM1P04553 51 aa4.06□□□□□ -1.76
TVP23C-210ENST00000584811 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
TVP23C-210ENST00000584811 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
TVP23C-210ENST00000584811 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
TVP23C-210ENST00000584811 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
TVP23C-210ENST00000584811 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
TVP23C-210ENST00000584811 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TVP23C-210ENST00000584811 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
TVP23C-210ENST00000584811 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
TVP23C-210ENST00000584811 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
TVP23C-210ENST00000584811 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
TVP23C-210ENST00000584811 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TVP23C-210ENST00000584811 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
TVP23C-210ENST00000584811 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
TVP23C-210ENST00000584811 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
TVP23C-210ENST00000584811 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
TVP23C-210ENST00000584811 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TVP23C-210ENST00000584811 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
TVP23C-210ENST00000584811 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
TVP23C-210ENST00000584811 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
TVP23C-210ENST00000584811 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
TVP23C-210ENST00000584811 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TVP23C-210ENST00000584811 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
TVP23C-210ENST00000584811 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
TVP23C-210ENST00000584811 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
TVP23C-210ENST00000584811 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
TVP23C-210ENST00000584811 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
TVP23C-210ENST00000584811 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TVP23C-210ENST00000584811 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
TVP23C-210ENST00000584811 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
TVP23C-210ENST00000584811 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
TVP23C-210ENST00000584811 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
TVP23C-210ENST00000584811 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
TVP23C-210ENST00000584811 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms