RNA–Protein interactions for RNA: ENST00000583648.5

KPNB1-214, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-214ENST00000583648 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
KPNB1-214ENST00000583648 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
KPNB1-214ENST00000583648 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
KPNB1-214ENST00000583648 MT1MQ8N339 61 aa5.18□□□□□ -1.58
KPNB1-214ENST00000583648 MT1LQ93083 61 aa5.17□□□□□ -1.58
KPNB1-214ENST00000583648 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
KPNB1-214ENST00000583648 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
KPNB1-214ENST00000583648 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
KPNB1-214ENST00000583648 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
KPNB1-214ENST00000583648 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
KPNB1-214ENST00000583648 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
KPNB1-214ENST00000583648 K7ERS5 55 aa5.09□□□□□ -1.59
KPNB1-214ENST00000583648 V9GYY9 64 aa5.09□□□□□ -1.59
KPNB1-214ENST00000583648 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
KPNB1-214ENST00000583648 MT4P47944 62 aa5.02□□□□□ -1.61
KPNB1-214ENST00000583648 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
KPNB1-214ENST00000583648 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
KPNB1-214ENST00000583648 PSPHP1O15172 72 aa5□□□□□ -1.61
KPNB1-214ENST00000583648 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
KPNB1-214ENST00000583648 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
KPNB1-214ENST00000583648 Q1T7F1 81 aa4.99□□□□□ -1.61
KPNB1-214ENST00000583648 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
KPNB1-214ENST00000583648 A6NED7 52 aa4.87□□□□□ -1.63
KPNB1-214ENST00000583648 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
KPNB1-214ENST00000583648 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
KPNB1-214ENST00000583648 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
KPNB1-214ENST00000583648 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
KPNB1-214ENST00000583648 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
KPNB1-214ENST00000583648 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
KPNB1-214ENST00000583648 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
KPNB1-214ENST00000583648 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
KPNB1-214ENST00000583648 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
KPNB1-214ENST00000583648 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
KPNB1-214ENST00000583648 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
KPNB1-214ENST00000583648 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
KPNB1-214ENST00000583648 ROMO1P60602 79 aa4.67□□□□□ -1.66
KPNB1-214ENST00000583648 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
KPNB1-214ENST00000583648 PCP4P48539 62 aa4.66□□□□□ -1.66
KPNB1-214ENST00000583648 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
KPNB1-214ENST00000583648 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
KPNB1-214ENST00000583648 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
KPNB1-214ENST00000583648 MT1AP04731 61 aa4.42□□□□□ -1.7
KPNB1-214ENST00000583648 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
KPNB1-214ENST00000583648 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
KPNB1-214ENST00000583648 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
KPNB1-214ENST00000583648 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
KPNB1-214ENST00000583648 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
KPNB1-214ENST00000583648 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
KPNB1-214ENST00000583648 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
KPNB1-214ENST00000583648 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
KPNB1-214ENST00000583648 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
KPNB1-214ENST00000583648 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
KPNB1-214ENST00000583648 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
KPNB1-214ENST00000583648 MT3P25713 68 aa4.07□□□□□ -1.76
KPNB1-214ENST00000583648 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
KPNB1-214ENST00000583648 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
KPNB1-214ENST00000583648 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
KPNB1-214ENST00000583648 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
KPNB1-214ENST00000583648 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
KPNB1-214ENST00000583648 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
KPNB1-214ENST00000583648 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
KPNB1-214ENST00000583648 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
KPNB1-214ENST00000583648 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
KPNB1-214ENST00000583648 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
KPNB1-214ENST00000583648 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-214ENST00000583648 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
KPNB1-214ENST00000583648 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
KPNB1-214ENST00000583648 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
KPNB1-214ENST00000583648 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
KPNB1-214ENST00000583648 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
KPNB1-214ENST00000583648 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
KPNB1-214ENST00000583648 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
KPNB1-214ENST00000583648 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
KPNB1-214ENST00000583648 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
KPNB1-214ENST00000583648 PRM1P04553 51 aa2.36□□□□□ -2.03
KPNB1-214ENST00000583648 INE1O15225 51 aa2.32□□□□□ -2.04
KPNB1-214ENST00000583648 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
KPNB1-214ENST00000583648 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 154.8 ms