RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
PPP4R1-225ENST00000583438 F8W1H4 67 aa2.79□□□□□ -1.96
PPP4R1-225ENST00000583438 MT1GP13640 62 aa2.79□□□□□ -1.96
PPP4R1-225ENST00000583438 MT-ATP8P03928 68 aa2.78□□□□□ -1.96
PPP4R1-225ENST00000583438 ATP5EP2Q5VTU8 51 aa2.78□□□□□ -1.96
PPP4R1-225ENST00000583438 MT1LQ93083 61 aa2.78□□□□□ -1.96
PPP4R1-225ENST00000583438 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
PPP4R1-225ENST00000583438 GTF2H5Q6ZYL4 71 aa2.74□□□□□ -1.97
PPP4R1-225ENST00000583438 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
PPP4R1-225ENST00000583438 MP68P56378 58 aa2.73□□□□□ -1.97
PPP4R1-225ENST00000583438 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
PPP4R1-225ENST00000583438 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
PPP4R1-225ENST00000583438 A0A0D9SG42 100 aa2.72□□□□□ -1.97
PPP4R1-225ENST00000583438 TRAV7A0A075B6U4 112 aa2.71□□□□□ -1.98
PPP4R1-225ENST00000583438 LINC00643Q86TS7 51 aa2.7□□□□□ -1.98
PPP4R1-225ENST00000583438 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
PPP4R1-225ENST00000583438 H3BPC8 53 aa2.67□□□□□ -1.98
PPP4R1-225ENST00000583438 V9GYY9 64 aa2.67□□□□□ -1.98
PPP4R1-225ENST00000583438 SPANXA2-OT1Q8N9U9 137 aa2.66□□□□□ -1.98
PPP4R1-225ENST00000583438 ACYP2P14621 99 aa2.64□□□□□ -1.99
PPP4R1-225ENST00000583438 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
PPP4R1-225ENST00000583438 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
PPP4R1-225ENST00000583438 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
PPP4R1-225ENST00000583438 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
PPP4R1-225ENST00000583438 SPTSSBQ8NFR3 76 aa2.57□□□□□ -2
PPP4R1-225ENST00000583438 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
PPP4R1-225ENST00000583438 KRTAP5-8O75690 187 aa2.56□□□□□ -2
PPP4R1-225ENST00000583438 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
PPP4R1-225ENST00000583438 LUZP6Q538Z0 58 aa2.55□□□□□ -2
PPP4R1-225ENST00000583438 SNURFQ9Y675 71 aa2.54□□□□□ -2
PPP4R1-225ENST00000583438 SCGB1A1P11684 91 aa2.53□□□□□ -2
PPP4R1-225ENST00000583438 A0A1B0GV90 55 aa2.51□□□□□ -2.01
PPP4R1-225ENST00000583438 PSPHP1O15172 72 aa2.5□□□□□ -2.01
PPP4R1-225ENST00000583438 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
PPP4R1-225ENST00000583438 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
PPP4R1-225ENST00000583438 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
PPP4R1-225ENST00000583438 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
PPP4R1-225ENST00000583438 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
PPP4R1-225ENST00000583438 COA5Q86WW8 74 aa2.46□□□□□ -2.02
PPP4R1-225ENST00000583438 A0A1B0GU33 70 aa2.44□□□□□ -2.02
PPP4R1-225ENST00000583438 TNP1P09430 55 aa2.42□□□□□ -2.02
PPP4R1-225ENST00000583438 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
PPP4R1-225ENST00000583438 PRO0628Q9UI54 55 aa2.39□□□□□ -2.03
PPP4R1-225ENST00000583438 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
PPP4R1-225ENST00000583438 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
PPP4R1-225ENST00000583438 J3QR89 54 aa2.33□□□□□ -2.04
PPP4R1-225ENST00000583438 MT1AP04731 61 aa2.33□□□□□ -2.04
PPP4R1-225ENST00000583438 ANAPC13Q9BS18 74 aa2.33□□□□□ -2.04
PPP4R1-225ENST00000583438 SERP2Q8N6R1 65 aa2.32□□□□□ -2.04
PPP4R1-225ENST00000583438 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
PPP4R1-225ENST00000583438 H7BZZ5 65 aa2.28□□□□□ -2.04
PPP4R1-225ENST00000583438 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
PPP4R1-225ENST00000583438 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
PPP4R1-225ENST00000583438 A0A1B0GU69 56 aa2.26□□□□□ -2.05
PPP4R1-225ENST00000583438 K7ERU9 68 aa2.19□□□□□ -2.06
PPP4R1-225ENST00000583438 K7ERS5 55 aa2.18□□□□□ -2.06
PPP4R1-225ENST00000583438 COX7CP15954 63 aa2.18□□□□□ -2.06
PPP4R1-225ENST00000583438 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
PPP4R1-225ENST00000583438 A6NED7 52 aa2.13□□□□□ -2.07
PPP4R1-225ENST00000583438 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
PPP4R1-225ENST00000583438 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
PPP4R1-225ENST00000583438 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
PPP4R1-225ENST00000583438 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
PPP4R1-225ENST00000583438 CCDC179H3BU77 68 aa2.02□□□□□ -2.09
PPP4R1-225ENST00000583438 UQCR11O14957 56 aa2.02□□□□□ -2.09
PPP4R1-225ENST00000583438 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
PPP4R1-225ENST00000583438 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
PPP4R1-225ENST00000583438 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
PPP4R1-225ENST00000583438 ATP5EP56381 51 aaPredicted RBP1.9□□□□□ -2.11
PPP4R1-225ENST00000583438 TMEM258P61165 79 aa1.86□□□□□ -2.11
PPP4R1-225ENST00000583438 Q1T7F1 81 aa1.84□□□□□ -2.11
PPP4R1-225ENST00000583438 ROMO1P60602 79 aa1.81□□□□□ -2.12
PPP4R1-225ENST00000583438 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
PPP4R1-225ENST00000583438 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
PPP4R1-225ENST00000583438 INE1O15225 51 aa1.55□□□□□ -2.16
PPP4R1-225ENST00000583438 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
PPP4R1-225ENST00000583438 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
PPP4R1-225ENST00000583438 PRM1P04553 51 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms