RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 MT1LQ93083 61 aa4.72□□□□□ -1.65
GGA3-214ENST00000582717 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
GGA3-214ENST00000582717 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
GGA3-214ENST00000582717 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
GGA3-214ENST00000582717 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
GGA3-214ENST00000582717 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
GGA3-214ENST00000582717 MT1MQ8N339 61 aa4.47□□□□□ -1.69
GGA3-214ENST00000582717 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
GGA3-214ENST00000582717 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
GGA3-214ENST00000582717 MT1GP13640 62 aa4.46□□□□□ -1.7
GGA3-214ENST00000582717 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
GGA3-214ENST00000582717 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
GGA3-214ENST00000582717 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
GGA3-214ENST00000582717 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
GGA3-214ENST00000582717 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
GGA3-214ENST00000582717 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
GGA3-214ENST00000582717 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
GGA3-214ENST00000582717 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
GGA3-214ENST00000582717 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
GGA3-214ENST00000582717 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
GGA3-214ENST00000582717 SPRR2EP22531 72 aa4.15□□□□□ -1.74
GGA3-214ENST00000582717 SPRR2BP35325 72 aa4.15□□□□□ -1.74
GGA3-214ENST00000582717 SPRR2AP35326 72 aa4.15□□□□□ -1.74
GGA3-214ENST00000582717 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
GGA3-214ENST00000582717 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
GGA3-214ENST00000582717 MT1AP04731 61 aa4.03□□□□□ -1.76
GGA3-214ENST00000582717 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
GGA3-214ENST00000582717 LCE3BQ5TA77 95 aa4□□□□□ -1.77
GGA3-214ENST00000582717 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
GGA3-214ENST00000582717 SPRR2DP22532 72 aa3.99□□□□□ -1.77
GGA3-214ENST00000582717 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
GGA3-214ENST00000582717 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
GGA3-214ENST00000582717 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
GGA3-214ENST00000582717 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
GGA3-214ENST00000582717 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
GGA3-214ENST00000582717 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
GGA3-214ENST00000582717 NEBP20929 6669 aa3.76□□□□□ -1.81
GGA3-214ENST00000582717 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
GGA3-214ENST00000582717 PRM1P04553 51 aa3.75□□□□□ -1.81
GGA3-214ENST00000582717 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
GGA3-214ENST00000582717 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
GGA3-214ENST00000582717 MT3P25713 68 aa3.57□□□□□ -1.84
GGA3-214ENST00000582717 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
GGA3-214ENST00000582717 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
GGA3-214ENST00000582717 MT4P47944 62 aa3.5□□□□□ -1.85
GGA3-214ENST00000582717 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
GGA3-214ENST00000582717 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
GGA3-214ENST00000582717 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
GGA3-214ENST00000582717 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
GGA3-214ENST00000582717 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
GGA3-214ENST00000582717 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
GGA3-214ENST00000582717 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
GGA3-214ENST00000582717 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
GGA3-214ENST00000582717 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
GGA3-214ENST00000582717 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
GGA3-214ENST00000582717 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
GGA3-214ENST00000582717 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
GGA3-214ENST00000582717 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
GGA3-214ENST00000582717 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
GGA3-214ENST00000582717 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
GGA3-214ENST00000582717 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
GGA3-214ENST00000582717 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
GGA3-214ENST00000582717 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
GGA3-214ENST00000582717 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
GGA3-214ENST00000582717 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
GGA3-214ENST00000582717 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
GGA3-214ENST00000582717 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
GGA3-214ENST00000582717 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
GGA3-214ENST00000582717 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
GGA3-214ENST00000582717 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
GGA3-214ENST00000582717 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
GGA3-214ENST00000582717 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
GGA3-214ENST00000582717 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
GGA3-214ENST00000582717 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
GGA3-214ENST00000582717 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
GGA3-214ENST00000582717 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
GGA3-214ENST00000582717 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 87.2 ms