RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
RFNG-208ENST00000582478 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
RFNG-208ENST00000582478 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
RFNG-208ENST00000582478 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
RFNG-208ENST00000582478 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
RFNG-208ENST00000582478 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
RFNG-208ENST00000582478 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
RFNG-208ENST00000582478 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
RFNG-208ENST00000582478 MT1EP04732 61 aa5.2□□□□□ -1.58
RFNG-208ENST00000582478 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
RFNG-208ENST00000582478 MT1LQ93083 61 aa5.18□□□□□ -1.58
RFNG-208ENST00000582478 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
RFNG-208ENST00000582478 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
RFNG-208ENST00000582478 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
RFNG-208ENST00000582478 MT1GP13640 62 aa5.11□□□□□ -1.59
RFNG-208ENST00000582478 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
RFNG-208ENST00000582478 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
RFNG-208ENST00000582478 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
RFNG-208ENST00000582478 PRM1P04553 51 aa5.08□□□□□ -1.6
RFNG-208ENST00000582478 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
RFNG-208ENST00000582478 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
RFNG-208ENST00000582478 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
RFNG-208ENST00000582478 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
RFNG-208ENST00000582478 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
RFNG-208ENST00000582478 LCE1EQ5T753 118 aa4.9□□□□□ -1.62
RFNG-208ENST00000582478 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
RFNG-208ENST00000582478 MT1MQ8N339 61 aa4.9□□□□□ -1.63
RFNG-208ENST00000582478 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
RFNG-208ENST00000582478 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
RFNG-208ENST00000582478 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
RFNG-208ENST00000582478 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
RFNG-208ENST00000582478 SPRR2EP22531 72 aa4.67□□□□□ -1.66
RFNG-208ENST00000582478 SPRR2BP35325 72 aa4.67□□□□□ -1.66
RFNG-208ENST00000582478 SPRR2AP35326 72 aa4.67□□□□□ -1.66
RFNG-208ENST00000582478 LCE1DQ5T752 114 aa4.65□□□□□ -1.66
RFNG-208ENST00000582478 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
RFNG-208ENST00000582478 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
RFNG-208ENST00000582478 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
RFNG-208ENST00000582478 MT1AP04731 61 aa4.48□□□□□ -1.69
RFNG-208ENST00000582478 SPRR2DP22532 72 aa4.43□□□□□ -1.7
RFNG-208ENST00000582478 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
RFNG-208ENST00000582478 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
RFNG-208ENST00000582478 MUC19Q7Z5P9 8384 aa4.23□□□□□ -1.73
RFNG-208ENST00000582478 MT4P47944 62 aa4.17□□□□□ -1.74
RFNG-208ENST00000582478 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
RFNG-208ENST00000582478 NEBP20929 6669 aa4.12□□□□□ -1.75
RFNG-208ENST00000582478 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
RFNG-208ENST00000582478 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
RFNG-208ENST00000582478 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
RFNG-208ENST00000582478 MT3P25713 68 aa3.87□□□□□ -1.79
RFNG-208ENST00000582478 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
RFNG-208ENST00000582478 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
RFNG-208ENST00000582478 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
RFNG-208ENST00000582478 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
RFNG-208ENST00000582478 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
RFNG-208ENST00000582478 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
RFNG-208ENST00000582478 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
RFNG-208ENST00000582478 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
RFNG-208ENST00000582478 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
RFNG-208ENST00000582478 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RFNG-208ENST00000582478 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
RFNG-208ENST00000582478 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
RFNG-208ENST00000582478 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
RFNG-208ENST00000582478 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
RFNG-208ENST00000582478 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
RFNG-208ENST00000582478 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RFNG-208ENST00000582478 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
RFNG-208ENST00000582478 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RFNG-208ENST00000582478 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
RFNG-208ENST00000582478 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
RFNG-208ENST00000582478 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
RFNG-208ENST00000582478 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
RFNG-208ENST00000582478 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
RFNG-208ENST00000582478 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
RFNG-208ENST00000582478 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
RFNG-208ENST00000582478 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
RFNG-208ENST00000582478 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
RFNG-208ENST00000582478 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms