RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
RTTN-207ENST00000581583 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
RTTN-207ENST00000581583 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
RTTN-207ENST00000581583 MT1GP13640 62 aa4.04□□□□□ -1.76
RTTN-207ENST00000581583 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
RTTN-207ENST00000581583 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
RTTN-207ENST00000581583 INE1O15225 51 aa4.03□□□□□ -1.76
RTTN-207ENST00000581583 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
RTTN-207ENST00000581583 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
RTTN-207ENST00000581583 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
RTTN-207ENST00000581583 MT1MQ8N339 61 aa3.99□□□□□ -1.77
RTTN-207ENST00000581583 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
RTTN-207ENST00000581583 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
RTTN-207ENST00000581583 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
RTTN-207ENST00000581583 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
RTTN-207ENST00000581583 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
RTTN-207ENST00000581583 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
RTTN-207ENST00000581583 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
RTTN-207ENST00000581583 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
RTTN-207ENST00000581583 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
RTTN-207ENST00000581583 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
RTTN-207ENST00000581583 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
RTTN-207ENST00000581583 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
RTTN-207ENST00000581583 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
RTTN-207ENST00000581583 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
RTTN-207ENST00000581583 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
RTTN-207ENST00000581583 SPRR2EP22531 72 aa3.65□□□□□ -1.83
RTTN-207ENST00000581583 SPRR2BP35325 72 aa3.65□□□□□ -1.83
RTTN-207ENST00000581583 SPRR2AP35326 72 aa3.65□□□□□ -1.83
RTTN-207ENST00000581583 MT1AP04731 61 aa3.58□□□□□ -1.84
RTTN-207ENST00000581583 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
RTTN-207ENST00000581583 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
RTTN-207ENST00000581583 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
RTTN-207ENST00000581583 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
RTTN-207ENST00000581583 SPRR2DP22532 72 aa3.51□□□□□ -1.85
RTTN-207ENST00000581583 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
RTTN-207ENST00000581583 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
RTTN-207ENST00000581583 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
RTTN-207ENST00000581583 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
RTTN-207ENST00000581583 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
RTTN-207ENST00000581583 NEBP20929 6669 aa3.42□□□□□ -1.86
RTTN-207ENST00000581583 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
RTTN-207ENST00000581583 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
RTTN-207ENST00000581583 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
RTTN-207ENST00000581583 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
RTTN-207ENST00000581583 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
RTTN-207ENST00000581583 MT3P25713 68 aa3.24□□□□□ -1.89
RTTN-207ENST00000581583 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
RTTN-207ENST00000581583 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
RTTN-207ENST00000581583 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
RTTN-207ENST00000581583 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
RTTN-207ENST00000581583 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
RTTN-207ENST00000581583 MT4P47944 62 aa3.04□□□□□ -1.92
RTTN-207ENST00000581583 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
RTTN-207ENST00000581583 PRM1P04553 51 aa3.01□□□□□ -1.93
RTTN-207ENST00000581583 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
RTTN-207ENST00000581583 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
RTTN-207ENST00000581583 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
RTTN-207ENST00000581583 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
RTTN-207ENST00000581583 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
RTTN-207ENST00000581583 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
RTTN-207ENST00000581583 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
RTTN-207ENST00000581583 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
RTTN-207ENST00000581583 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
RTTN-207ENST00000581583 LCE1CQ5T751 118 aa2.57□□□□□ -2
RTTN-207ENST00000581583 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
RTTN-207ENST00000581583 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
RTTN-207ENST00000581583 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
RTTN-207ENST00000581583 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
RTTN-207ENST00000581583 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
RTTN-207ENST00000581583 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
RTTN-207ENST00000581583 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
RTTN-207ENST00000581583 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
RTTN-207ENST00000581583 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
RTTN-207ENST00000581583 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
RTTN-207ENST00000581583 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
RTTN-207ENST00000581583 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
RTTN-207ENST00000581583 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 18.2 ms