RNA–Protein interactions for RNA: ENST00000581448.5

PLEKHM1-207, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 1 (best)

Gene PLEKHM1, Length 3,292 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-207ENST00000581448 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
PLEKHM1-207ENST00000581448 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
PLEKHM1-207ENST00000581448 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
PLEKHM1-207ENST00000581448 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
PLEKHM1-207ENST00000581448 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
PLEKHM1-207ENST00000581448 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
PLEKHM1-207ENST00000581448 MT1LQ93083 61 aa4.37□□□□□ -1.71
PLEKHM1-207ENST00000581448 MT1GP13640 62 aa4.35□□□□□ -1.71
PLEKHM1-207ENST00000581448 MT1EP04732 61 aa4.32□□□□□ -1.72
PLEKHM1-207ENST00000581448 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
PLEKHM1-207ENST00000581448 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
PLEKHM1-207ENST00000581448 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
PLEKHM1-207ENST00000581448 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
PLEKHM1-207ENST00000581448 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
PLEKHM1-207ENST00000581448 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
PLEKHM1-207ENST00000581448 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
PLEKHM1-207ENST00000581448 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
PLEKHM1-207ENST00000581448 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
PLEKHM1-207ENST00000581448 MT1MQ8N339 61 aa4.04□□□□□ -1.76
PLEKHM1-207ENST00000581448 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
PLEKHM1-207ENST00000581448 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
PLEKHM1-207ENST00000581448 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.78
PLEKHM1-207ENST00000581448 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
PLEKHM1-207ENST00000581448 PRM1P04553 51 aa3.85□□□□□ -1.79
PLEKHM1-207ENST00000581448 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
PLEKHM1-207ENST00000581448 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PLEKHM1-207ENST00000581448 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
PLEKHM1-207ENST00000581448 SPRR2EP22531 72 aa3.8□□□□□ -1.8
PLEKHM1-207ENST00000581448 SPRR2BP35325 72 aa3.8□□□□□ -1.8
PLEKHM1-207ENST00000581448 SPRR2AP35326 72 aa3.8□□□□□ -1.8
PLEKHM1-207ENST00000581448 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
PLEKHM1-207ENST00000581448 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
PLEKHM1-207ENST00000581448 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
PLEKHM1-207ENST00000581448 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
PLEKHM1-207ENST00000581448 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
PLEKHM1-207ENST00000581448 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
PLEKHM1-207ENST00000581448 SPRR2DP22532 72 aa3.63□□□□□ -1.83
PLEKHM1-207ENST00000581448 MT1AP04731 61 aa3.61□□□□□ -1.83
PLEKHM1-207ENST00000581448 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PLEKHM1-207ENST00000581448 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
PLEKHM1-207ENST00000581448 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
PLEKHM1-207ENST00000581448 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
PLEKHM1-207ENST00000581448 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
PLEKHM1-207ENST00000581448 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
PLEKHM1-207ENST00000581448 NEBP20929 6669 aa3.36□□□□□ -1.87
PLEKHM1-207ENST00000581448 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
PLEKHM1-207ENST00000581448 MT4P47944 62 aa3.32□□□□□ -1.88
PLEKHM1-207ENST00000581448 MT3P25713 68 aa3.26□□□□□ -1.89
PLEKHM1-207ENST00000581448 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PLEKHM1-207ENST00000581448 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
PLEKHM1-207ENST00000581448 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
PLEKHM1-207ENST00000581448 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
PLEKHM1-207ENST00000581448 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
PLEKHM1-207ENST00000581448 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
PLEKHM1-207ENST00000581448 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
PLEKHM1-207ENST00000581448 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
PLEKHM1-207ENST00000581448 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
PLEKHM1-207ENST00000581448 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
PLEKHM1-207ENST00000581448 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
PLEKHM1-207ENST00000581448 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
PLEKHM1-207ENST00000581448 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
PLEKHM1-207ENST00000581448 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
PLEKHM1-207ENST00000581448 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
PLEKHM1-207ENST00000581448 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
PLEKHM1-207ENST00000581448 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
PLEKHM1-207ENST00000581448 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
PLEKHM1-207ENST00000581448 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
PLEKHM1-207ENST00000581448 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
PLEKHM1-207ENST00000581448 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
PLEKHM1-207ENST00000581448 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
PLEKHM1-207ENST00000581448 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
PLEKHM1-207ENST00000581448 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
PLEKHM1-207ENST00000581448 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
PLEKHM1-207ENST00000581448 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PLEKHM1-207ENST00000581448 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
PLEKHM1-207ENST00000581448 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PLEKHM1-207ENST00000581448 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
PLEKHM1-207ENST00000581448 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 31.5 ms