RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
RBFOX3-201ENST00000578887 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
RBFOX3-201ENST00000578887 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
RBFOX3-201ENST00000578887 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
RBFOX3-201ENST00000578887 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
RBFOX3-201ENST00000578887 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
RBFOX3-201ENST00000578887 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
RBFOX3-201ENST00000578887 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
RBFOX3-201ENST00000578887 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
RBFOX3-201ENST00000578887 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
RBFOX3-201ENST00000578887 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.65
RBFOX3-201ENST00000578887 MT1LQ93083 61 aa4.71□□□□□ -1.65
RBFOX3-201ENST00000578887 MT1EP04732 61 aa4.67□□□□□ -1.66
RBFOX3-201ENST00000578887 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
RBFOX3-201ENST00000578887 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
RBFOX3-201ENST00000578887 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
RBFOX3-201ENST00000578887 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
RBFOX3-201ENST00000578887 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
RBFOX3-201ENST00000578887 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
RBFOX3-201ENST00000578887 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
RBFOX3-201ENST00000578887 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
RBFOX3-201ENST00000578887 MT1GP13640 62 aa4.52□□□□□ -1.69
RBFOX3-201ENST00000578887 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
RBFOX3-201ENST00000578887 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
RBFOX3-201ENST00000578887 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
RBFOX3-201ENST00000578887 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
RBFOX3-201ENST00000578887 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
RBFOX3-201ENST00000578887 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
RBFOX3-201ENST00000578887 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
RBFOX3-201ENST00000578887 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
RBFOX3-201ENST00000578887 MT1MQ8N339 61 aa4.35□□□□□ -1.71
RBFOX3-201ENST00000578887 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
RBFOX3-201ENST00000578887 MT3P25713 68 aa4.31□□□□□ -1.72
RBFOX3-201ENST00000578887 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
RBFOX3-201ENST00000578887 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
RBFOX3-201ENST00000578887 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
RBFOX3-201ENST00000578887 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
RBFOX3-201ENST00000578887 SPRR2EP22531 72 aa4.15□□□□□ -1.75
RBFOX3-201ENST00000578887 SPRR2BP35325 72 aa4.15□□□□□ -1.75
RBFOX3-201ENST00000578887 SPRR2AP35326 72 aa4.15□□□□□ -1.75
RBFOX3-201ENST00000578887 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
RBFOX3-201ENST00000578887 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
RBFOX3-201ENST00000578887 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
RBFOX3-201ENST00000578887 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
RBFOX3-201ENST00000578887 SPRR2DP22532 72 aa3.98□□□□□ -1.77
RBFOX3-201ENST00000578887 MT1AP04731 61 aa3.95□□□□□ -1.78
RBFOX3-201ENST00000578887 NEBP20929 6669 aa3.95□□□□□ -1.78
RBFOX3-201ENST00000578887 PRM1P04553 51 aa3.95□□□□□ -1.78
RBFOX3-201ENST00000578887 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
RBFOX3-201ENST00000578887 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
RBFOX3-201ENST00000578887 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
RBFOX3-201ENST00000578887 MT4P47944 62 aa3.5□□□□□ -1.85
RBFOX3-201ENST00000578887 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
RBFOX3-201ENST00000578887 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
RBFOX3-201ENST00000578887 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
RBFOX3-201ENST00000578887 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
RBFOX3-201ENST00000578887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
RBFOX3-201ENST00000578887 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
RBFOX3-201ENST00000578887 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
RBFOX3-201ENST00000578887 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
RBFOX3-201ENST00000578887 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
RBFOX3-201ENST00000578887 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
RBFOX3-201ENST00000578887 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
RBFOX3-201ENST00000578887 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
RBFOX3-201ENST00000578887 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
RBFOX3-201ENST00000578887 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
RBFOX3-201ENST00000578887 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
RBFOX3-201ENST00000578887 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
RBFOX3-201ENST00000578887 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -2
RBFOX3-201ENST00000578887 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RBFOX3-201ENST00000578887 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
RBFOX3-201ENST00000578887 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
RBFOX3-201ENST00000578887 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 194.6 ms